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2008

Dongarra, J., G. H. Golub, E. Grosse, C. Moler, and K. Moore, “Netlib and NA-Net: Building a Scientific Computing Community,” IEEE Annals of the History of Computing, vol. 30, no. 2, pp. 30-41, January 2008.

(352.71 KB)

Fürlinger, K., and S. Moore, “OpenMP-centric Performance Analysis of Hybrid Applications,” Proc. 2008 IEEE International Conference on Cluster Computing (CLUSTER 2008), Tsukuba, Japan, January 2008.

(218.63 KB)

Ltaeif, H., J. Kurzak, and J. Dongarra, “Parallel Block Hessenberg Reduction using Algorithms-By-Tiles for Multicore Architectures Revisited,” University of Tennessee Computer Science Technical Report, UT-CS-08-624 (also LAPACK Working Note 208), August 2008.

(420.31 KB)

Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, “Parallel Tiled QR Factorization for Multicore Architectures,” Concurrency and Computation: Practice and Experience, vol. 20, pp. 1573-1590, January 2008.

(277.92 KB)

Hernandez, O., F. Song, B. Chapman, J. Dongarra, B. Mohr, S. Moore, and F. Wolf, “Performance Instrumentation and Compiler Optimizations for MPI/OpenMP Applications,” Lecture Notes in Computer Science, OpenMP Shared Memory Parallel Programming, vol. 4315: Springer Berlin / Heidelberg, 00 2008.

(350.9 KB)

Dongarra, J., “Performance of Various Computers Using Standard Linear Equations Software (Linpack Benchmark Report),” University of Tennessee Computer Science Technical Report, CS-89-85, January 2008.

(6.42 MB)

Bailey, D., J. Chame, C. Chen, J. Dongarra, M. Hall, J. K. Hollingsworth, P. D. Hovland, S. Moore, K. Seymour, J. Shin, et al., “PERI Auto-tuning,” Proc. SciDAC 2008, vol. 125, Seatlle, Washington, Journal of Physics, January 2008.

(873.75 KB)

Kurzak, J., A. Buttari, P. Luszczek, and J. Dongarra, “The PlayStation 3 for High Performance Scientific Computing,” University of Tennessee Computer Science Technical Report, no. UT-CS-08-608, January 2008.

(2.45 MB)

Kurzak, J., A. Buttari, P. Luszczek, and J. Dongarra, “The PlayStation 3 for High Performance Scientific Computing,” Computing in Science and Engineering, pp. 80-83, January 2008.

(2.45 MB)

Dongarra, J., and J. Langou, “The Problem with the Linpack Benchmark Matrix Generator,” University of Tennessee Computer Science Technical Report, UT-CS-08-621 (also LAPACK Working Note 206), June 2008.

(136.41 KB)

Kurzak, J., and J. Dongarra, “QR Factorization for the CELL Processor,” University of Tennessee Computer Science Technical Report, UT-CS-08-616 (also LAPACK Working Note 201), May 2008.

(194.95 KB)

Gustavson, F. G., J. Wasniewski, and J. Dongarra, “Rectangular Full Packed Format for Cholesky's Algorithm: Factorization, Solution and Inversion,” University of Tennessee Computer Science Technical Report, UT-CS-08-614 (also LAPACK Working Note 199), April 2008.

(896.03 KB)

Bouteiller, A., G. Bosilca, and J. Dongarra, “Redesigning the Message Logging Model for High Performance,” International Supercomputer Conference (ISC 2008), Dresden, Germany, January 2008.

(622.1 KB)

Li, Y., and J. Dongarra, “Request Sequencing: Enabling Workflow for Efficient Parallel Problem Solving in GridSolve,” ICL Technical Report, no. ICL-UT-08-01, April 2008.

(1.64 MB)

Li, Y., J. Dongarra, K. Seymour, and A. YarKhan, “Request Sequencing: Enabling Workflow for Efficient Problem Solving in GridSolve,” International Conference on Grid and Cooperative Computing (GCC 2008) (submitted), Shenzhen, China, October 2008.

(1.64 MB)

Dongarra, J., J-F. Pineau, Y. Robert, Z. Shi, and F. Vivien, “Revisiting Matrix Product on Master-Worker Platforms,” International Journal of Foundations of Computer Science (IJFCS), vol. 19, no. 6, pp. 1317-1336, December 2008.

(248.66 KB)

Kurzak, J., A. Buttari, and J. Dongarra, “Solving Systems of Linear Equations on the CELL Processor Using Cholesky Factorization,” IEEE Transactions on Parallel and Distributed Systems, vol. 19, no. 9, pp. 1-11, January 2008.

(751.57 KB)

Baboulin, M., S. Tomov, and J. Dongarra, “Some Issues in Dense Linear Algebra for Multicore and Special Purpose Architectures,” PARA 2008, 9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, Trondheim Norway, May 2008.

Baboulin, M., J. Dongarra, and S. Tomov, “Some Issues in Dense Linear Algebra for Multicore and Special Purpose Architectures,” University of Tennessee Computer Science Technical Report, UT-CS-08-615 (also LAPACK Working Note 200), January 2008.

(289.93 KB)

Voemel, C., S. Tomov, O. Marques, A. Canning, L-W. Wang, and J. Dongarra, “State-of-the-Art Eigensolvers for Electronic Structure Calculations of Large Scale Nano-Systems,” Journal of Computational Physics, vol. 227, no. 15, pp. 7113-7124, January 2008.

Jagode, H., J. Hein, and A. Trew, “Task placement of parallel multi-dimensional FFTs on a mesh communication network,” University of Tennessee Computer Science Technical Report, no. UT-CS-08-613, January 2008.

(2.33 MB)

Tomov, S., J. Dongarra, and M. Baboulin, “Towards Dense Linear Algebra for Hybrid GPU Accelerated Manycore Systems,” University of Tennessee Computer Science Technical Report, UT-CS-08-632 (also LAPACK Working Note 210), January 2008.

(606.41 KB)

Dongarra, J., “A Tribute to Gene Golub,” Computing in Science and Engineering: IEEE, pp. 5, January 2008.

Wolf, F., B. Wylie, E. Abraham, W. Frings, K. Fürlinger, M. Geimer, M-A. Hermanns, B. Mohr, S. Moore, and M. Pfeifer, “Usage of the Scalasca Toolset for Scalable Performance Analysis of Large-scale Parallel Applications,” Proceedings of the 2nd International Workshop on Tools for High Performance Computing, Stuttgart, Germany, Springer, pp. 157-167, January 2008.

(229.2 KB)

Baboulin, M., and S. Gratton, “Using dual techniques to derive componentwise and mixed condition numbers for a linear functional of a linear least squares solution,” University of Tennessee Computer Science Technical Report, UT-CS-08-622 (also LAPACK Working Note 207), January 2008.

(159.65 KB)

Buttari, A., J. Dongarra, J. Kurzak, P. Luszczek, and S. Tomov, “Using Mixed Precision for Sparse Matrix Computations to Enhance the Performance while Achieving 64-bit Accuracy,” ACM Transactions on Mathematical Software, vol. 34, no. 4, pp. 17-22, 00 2008.

(364.48 KB)

Fürlinger, K., and S. Moore, “Visualizing the Program Execution Control Flow of OpenMP Applications,” Proc. 4th International Workshop on OpenMP (IWOMP 2008), West Lafayette, Indiana, Lecture Notes in Computer Science 5004, pp. 181-190, January 2008.

(194.25 KB)

2009

Baboulin, M., A. Buttari, J. Dongarra, J. Kurzak, J. Langou, J. Langou, P. Luszczek, and S. Tomov, “Accelerating Scientific Computations with Mixed Precision Algorithms,” Computer Physics Communications, vol. 180, issue 12, pp. 2526-2533, December 2009. DOI: 10.1016/j.cpc.2008.11.005

(402.69 KB)

Tomov, S., and J. Dongarra, “Accelerating the Reduction to Upper Hessenberg Form through Hybrid GPU-Based Computing,” University of Tennessee Computer Science Technical Report, UT-CS-09-642 (also LAPACK Working Note 219), May 2009.

(2.37 MB)

Demmel, J., J. Dongarra, A. Fox, S. Williams, V. Volkov, and K. Yelick, “Accelerating Time-To-Solution for Computational Science and Engineering,” SciDAC Review, 00 2009.

(739.11 KB)

Dongarra, J., G. Bosilca, R. Delmas, and J. Langou, “Algorithmic Based Fault Tolerance Applied to High Performance Computing,” Journal of Parallel and Distributed Computing, vol. 69, pp. 410-416, 00 2009.

(313.55 KB)

Song, F., S. Moore, and J. Dongarra, “Analytical Modeling and Optimization for Affinity Based Thread Scheduling on Multicore Systems,” IEEE Cluster 2009, New Orleans, August 2009.

(395.53 KB)

Fürlinger, K., and S. Moore, “Capturing and Analyzing the Execution Control Flow of OpenMP Applications,” International Journal of Parallel Programming, vol. 37, no. 3, pp. 266-276, 00 2009.

Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, “A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures,” Parallel Computing, vol. 35, pp. 38-53, 00 2009.

(274.74 KB)

Agullo, E., B. Hadri, H. Ltaeif, and J. Dongarra, “Comparative Study of One-Sided Factorizations with Multiple Software Packages on Multi-Core Hardware,” 2009 International Conference for High Performance Computing, Networking, Storage, and Analysis (SC '09) (to appear), 00 2009.

(515.63 KB)

“Computational Science – ICCS 2009, Proceedings of the 9th International Conference,” Lecture Notes in Computer Science: Theoretical Computer Science and General Issues, vol. -, no. 5544-5545, Baton Rouge, LA, May 2009.

Baboulin, M., J. Dongarra, S. Gratton, and J. Langou, “Computing the Conditioning of the Components of a Linear Least-squares Solution,” Numerical Linear Algebra with Applications, vol. 16, no. 7, pp. 517-533, 00 2009.

(374.97 KB)

Bosilca, G., C. Coti, T. Herault, P. Lemariner, and J. Dongarra, “Constructing resiliant communication infrastructure for runtime environments,” Innovative Computing Laboratory Technical Report, no. ICL-UT-09-02, July 2009.

(463.71 KB)

Lemariner, P., G. Bosilca, C. Coti, T. Herault, and J. Dongarra, “Constructing Resilient Communication Infrastructure for Runtime Environments,” ParCo 2009, Lyon France, September 2009.

Kurzak, J., H. Ltaeif, J. Dongarra, and R. M. Badia, “Dependency-Driven Scheduling of Dense Matrix Factorizations on Shared-Memory Systems,” PPAM 2009, Poland, September 2009.

Song, F., A. YarKhan, and J. Dongarra, “Dynamic Task Scheduling for Linear Algebra Algorithms on Distributed-Memory Multicore Systems,” International Conference for High Performance Computing, Networking, Storage, and Analysis (SC '09), Portland, OR, November 2009.

(502.49 KB)

Hadri, B., H. Ltaeif, E. Agullo, and J. Dongarra, “Enhancing Parallelism of Tile QR Factorization for Multicore Architectures,” Submitted to Transaction on Parallel and Distributed Systems, December 2009.

(464.23 KB)

Kurzak, J., and J. Dongarra, “Fully Dynamic Scheduler for Numerical Computing on Multicore Processors,” University of Tennessee Computer Science Department Technical Report, UT-CS-09-643 (Also LAPACK Working Note 220), 00 2009.

(488.24 KB)

Cunha, M., J. Telles, A. YarKhan, and J. Dongarra, “Grid Computing applied to the Boundary Element Method,” Proceedings of the First International Conference on Parallel, Distributed and Grid Computing for Engineering, vol. 27, no. :104203/9027, Stirlingshire, UK, Civil-Comp Press, 00 2009.

Chen, Z., and J. Dongarra, “Highly Scalable Self-Healing Algorithms for High Performance Scientific Computing,” IEEE Transactions on Computers, vol. 58, issue 11, pp. 1512-1524, November 2009. DOI: 10.1109/TC.2009.42

(1.81 MB)

Jagode, H., J. Dongarra, S. Alam, J. Vetter, W. Spear, and A. D. Malony, “A Holistic Approach for Performance Measurement and Analysis for Petascale Applications,” ICCS 2009 Joint Workshop: Tools for Program Development and Analysis in Computational Science and Software Engineering for Large-Scale Computing, vol. 2009, Baton Rouge, Louisiana, Springer-Verlag Berlin Heidelberg 2009, pp. 686-695, May 2009.

(3.96 MB)

Alam, S., R. F. Barrett, H. Jagode, J. A. Kuehn, S. W. Poole, and R. Sankaran, “Impact of Quad-core Cray XT4 System and Software Stack on Scientific Computation,” Euro-Par 2009, Lecture Notes in Computer Science, vol. 5704/2009, Delft, The Netherlands, Springer Berlin / Heidelberg, pp. 334-344, August 2009.

(312.74 KB)

Dongarra, J., P. Beckman, P. Aerts, F. Cappello, T. Lippert, S. Matsuoka, P. Messina, T. Moore, R. Stevens, A. Trefethen, et al., “The International Exascale Software Project: A Call to Cooperative Action by the Global High Performance Community,” International Journal of High Performance Computing Applications (to appear), July 2009.

(203.04 KB)

Jagode, H., S. Moore, D. Terpstra, J. Dongarra, A. Knuepfer, M. Jurenz, M. S. Mueller, and W. E. Nagel, “I/O Performance Analysis for the Petascale Simulation Code FLASH,” ISC'09, Hamburg, Germany, June 2009.

(88.88 KB)

Portillo, R., P. J. Teller, D. Cronk, and S. Moore, “Making Performance Analysis and Tuning Part of the Software Development Cycle,” Proceedings of DoD HPCMP UGC 2009, San Diego, CA, IEEE, June 2009.

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