Publications

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Book
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part V,” Lecture Notes in Computer Science, 1, no. 12141: Springer International Publishing, pp. 618, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VII,” Lecture Notes in Computer Science, 1, no. 12143: Springer International Publishing, pp. 775, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part II,” Lecture Notes in Computer Science, 1, no. 12138: Springer International Publishing, pp. 697, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part IV,” Lecture Notes in Computer Science, 1, no. 12140: Springer International Publishing, pp. 668, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VI,” Lecture Notes in Computer Science, 1, no. 12142: Springer International Publishing, pp. 667, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part I,” Lecture Notes in Computer Science, 1, no. 12137: Springer International Publishing, pp. 707, June 2020.
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part III,” Lecture Notes in Computer Science, 1, no. 12139: Springer International Publishing, pp. 648, June 2020.
Jagode, H., H. Anzt, H. Ltaief, and P. Luszczek, Lecture Notes in Computer Science: High Performance Computing , vol. 12761: Springer International Publishing, 2021.
Snir, M., S. Otto, S. Huss-Lederman, D. Walker, and J. Dongarra, MPI - The Complete Reference, Volume 1: The MPI Core , Second, Cambridge, MA, USA, MIT Press, pp. 426, August 1998.
Dongarra, J., I. Duff, D. Sorensen, and H. van der Vorst, Numerical Linear Algebra for High-Performance Computers,” Software, Environments and Tools: SIAM, 1998.
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part II,” Lecture Notes in Computer Science, no. 12044: Springer International Publishing, pp. 503, March 2020.
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part I,” Lecture Notes in Computer Science, 1, no. 12043: Springer International Publishing, pp. 581, March 2020.
Penchoff, D. A., T. L. Windus, and C. C. Peterson, Rare Earth Elements and Actinides: Progress in Computational Science Applications,” ACS Symposium Series, vol. 1388, Washington, DC, American Chemical Society, October 2021.
Book Chapter
Dongarra, J., M. Gates, A. Haidar, J. Kurzak, P. Luszczek, S. Tomov, and I. Yamazaki, Accelerating Numerical Dense Linear Algebra Calculations with GPUs,” Numerical Computations with GPUs: Springer International Publishing, pp. 3-28, 2014.  (1.06 MB)
Anzt, H., M. Casas, C. I. Malossi, E. S. Quintana-Ortí, F. Scheidegger, and S. Zhuang, Approximate Computing for Scientific Applications,” Approximate Computing Techniques, 322: Springer International Publishing, pp. 415 - 465, January 2022.
Abdelfattah, A., S. Tomov, and J. Dongarra, Batch QR Factorization on GPUs: Design, Optimization, and Tuning,” Lecture Notes in Computer Science, vol. 13350, Cham, Springer International Publishing, June 2022.
Nath, R., S. Tomov, and J. Dongarra, Blas for GPUs,” Scientific Computing with Multicore and Accelerators, Boca Raton, Florida, CRC Press, 2010.  (1.05 MB)
Anzt, H., J. Dongarra, M. Gates, J. Kurzak, P. Luszczek, S. Tomov, and I. Yamazaki, Bringing High Performance Computing to Big Data Algorithms,” Handbook of Big Data Technologies: Springer, 2017.  (1.22 MB)
Tomov, S., and J. Dongarra, Dense Linear Algebra for Hybrid GPU-based Systems,” Scientific Computing with Multicore and Accelerators, Boca Raton, Florida, CRC Press, 2010.
Baboulin, M., J. Dongarra, A. Remy, S. Tomov, and I. Yamazaki, Dense Symmetric Indefinite Factorization on GPU Accelerated Architectures,” Lecture Notes in Computer Science, vol. 9573: Springer International Publishing, pp. 86-95, September 2015, 2016.  (327.14 KB)
Barry, D., A. Danalis, and H. Jagode, Effortless Monitoring of Arithmetic Intensity with PAPI’s Counter Analysis Toolkit,” Tools for High Performance Computing 2018/2019: Springer, pp. 195–218, 2021.
Beckman, P., J. Dongarra, N. Ferrier, G. Fox, T. Moore, D. Reed, and M. Beck, Harnessing the Computing Continuum for Programming Our World,” Fog Computing: Theory and Practice: John Wiley & Sons, Inc., 2020.  (1.4 MB)
Dongarra, J., N. J. Higham, M. R. Dennis, P. Glendinning, P. A. Martin, F. Santosa, and J. Tanner, High-Performance Computing,” The Princeton Companion to Applied Mathematics, Princeton, New Jersey, Princeton University Press, pp. 839-842, 2015.
Dongarra, J., and P. Luszczek, HPC Challenge: Design, History, and Implementation Highlights,” Contemporary High Performance Computing: From Petascale Toward Exascale, Boca Raton, FL, Taylor and Francis, 2013.  (790.01 KB)
Beck, M., T. Moore, P. Luszczek, and A. Danalis, Interoperable Convergence of Storage, Networking, and Computation,” Advances in Information and Communication: Proceedings of the 2019 Future of Information and Communication Conference (FICC), no. 2: Springer International Publishing, pp. 667-690, 2020.  (1.8 MB)
Penchoff, D. A., E. Valeev, H. Jagode, P. Luszczek, A. Danalis, G. Bosilca, R. J. Harrison, J. Dongarra, and T. L. Windus, An Introduction to High Performance Computing and Its Intersection with Advances in Modeling Rare Earth Elements and Actinides,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 3-53, October 2021.
Vetter, J., R. Glassbrook, K. Schwan, S. Yalamanchili, M. Horton, A. Gavrilovska, M. Slawinska, J. Dongarra, J. Meredith, P. Roth, et al., Keeneland: Computational Science Using Heterogeneous GPU Computing,” Contemporary High Performance Computing: From Petascale Toward Exascale, Boca Raton, FL, Taylor and Francis, 2013.  (2.7 MB)
Bai, Z., J. Demmel, J. Dongarra, J. Langou, and J. Wang, LAPACK,” Handbook of Linear Algebra, Second, Boca Raton, FL, CRC Press, 2013.  (223.21 KB)
Hoefler, T., J. M. Squyres, G. Fagg, G. Bosilca, W. Rehm, and A. Lumsdaine, A New Approach to MPI Collective Communication Implementations,” Distributed and Parallel Systems: Springer US, pp. 45-54, 2007.  (140.2 KB)
Parker, S., J. Mellor-Crummey, D. H. Ahn, H. Jagode, H. Brunst, S. Shende, A. D. Malony, D. DelSignore, R. Tschuter, R. Castain, et al., Performance Analysis and Debugging Tools at Scale,” Exascale Scientific Applications: Scalability and Performance Portability: Chapman & Hall / CRC Press, pp. 17-50, November 2017.
Danalis, A., and H. Jagode, Performance Application Programming Interface,” Accelerated Computing with HIP: Sun, Baruah and Kaeli, December 2022.
Abdelfattah, A., A. Haidar, S. Tomov, and J. Dongarra, Performance, Design, and Autotuning of Batched GEMM for GPUs,” High Performance Computing: 31st International Conference, ISC High Performance 2016, Frankfurt, Germany, June 19-23, 2016, Proceedings, no. 9697: Springer International Publishing, pp. 21–38, 2016.  (1.98 MB)
Penchoff, D. A., C. B. Sims, and T. L. Windus, Rare Earth Elements and Critical Materials: Uses and Availability,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 63-74, October 2021.
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, J. Kurzak, P. Luszczek, S. Tomov, and J. Dongarra, Scalable Dense Linear Algebra on Heterogeneous Hardware,” HPC: Transition Towards Exascale Processing, in the series Advances in Parallel Computing, 2013.  (760.32 KB)
Aupy, G., and Y. Robert, Scheduling for Fault-Tolerance: An Introduction,” Topics in Parallel and Distributed Computing: Springer International Publishing, pp. 143–170, 2018.
Hori, A., Y. Tsujita, A. Shimada, K. Yoshinaga, N. Mitaro, G. Fukazawa, M. Sato, G. Bosilca, A. Bouteiller, and T. Herault, System Software for Many-Core and Multi-Core Architectures,” Advanced Software Technologies for Post-Peta Scale Computing: The Japanese Post-Peta CREST Research Project, Singapore, Springer Singapore, pp. 59–75, 2019.
Conference Paper
Gates, M., H. Anzt, J. Kurzak, and J. Dongarra, Accelerating Collaborative Filtering for Implicit Feedback Datasets using GPUs,” 2015 IEEE International Conference on Big Data (IEEE BigData 2015), Santa Clara, CA, IEEE, November 2015.  (1.02 MB)
Gates, M., A. Haidar, and J. Dongarra, Accelerating Eigenvector Computation in the Nonsymmetric Eigenvalue Problem,” VECPAR 2014, Eugene, OR, June 2014.  (199.44 KB)
Ayala, A., S. Tomov, M. Stoyanov, A. Haidar, and J. Dongarra, Accelerating Multi - Process Communication for Parallel 3-D FFT,” 2021 Workshop on Exascale MPI (ExaMPI), St. Louis, MO, USA, IEEE, December 2021.
Jagode, H., A. Danalis, G. Bosilca, and J. Dongarra, Accelerating NWChem Coupled Cluster through dataflow-based Execution,” 11th International Conference on Parallel Processing and Applied Mathematics (PPAM 2015), Krakow, Poland, Springer International Publishing, September 2015.  (452.82 KB)
Anzt, H., S. Tomov, and J. Dongarra, Accelerating the LOBPCG method on GPUs using a blocked Sparse Matrix Vector Product,” Spring Simulation Multi-Conference 2015 (SpringSim'15), Alexandria, VA, SCS, April 2015.  (1.46 MB)
Yamazaki, I., T. Mary, J. Kurzak, S. Tomov, and J. Dongarra, Access-averse Framework for Computing Low-rank Matrix Approximations,” First International Workshop on High Performance Big Graph Data Management, Analysis, and Mining, Washington, DC, October 2014.
Dongarra, J., S. Moore, P. Mucci, K. Seymour, and H. You, Accurate Cache and TLB Characterization Using Hardware Counters,” International Conference on Computational Science (ICCS 2004), Krakow, Poland, Springer, June 2004.  (167.1 KB)
Luo, X., W. Wu, G. Bosilca, T. Patinyasakdikul, L. Wang, and J. Dongarra, ADAPT: An Event-Based Adaptive Collective Communication Framework,” The 27th International Symposium on High-Performance Parallel and Distributed Computing (HPDC '18), Tempe, Arizona, ACM Press, June 2018.  (493.65 KB)
Anzt, H., J. Dongarra, and E. S. Quintana-Orti, Adaptive Precision Solvers for Sparse Linear Systems,” 3rd International Workshop on Energy Efficient Supercomputing (E2SC '15), Austin, TX, ACM, November 2015.
Thiyagalingam, J., G. von Laszewski, J. Yin, M. Emani, J. Papay, G. Barrett, P. Luszczek, A. Tsaris, C. Kirkpatrick, F. Wang, et al., AI Benchmarking for Science: Efforts from the MLCommons Science Working Group,” Lecture Notes in Computer Science, vol. 13387: Springer International Publishing, pp. 47 - 64, January 2023.
Yamazaki, I., A. Abdelfattah, A. Ida, S. Ohshima, S. Tomov, R. Yokota, and J. Dongarra, Analyzing Performance of BiCGStab with Hierarchical Matrix on GPU Clusters,” IEEE International Parallel and Distributed Processing Symposium (IPDPS), Vancouver, BC, Canada, IEEE, May 2018.  (1.37 MB)
Ribizel, T., and H. Anzt, Approximate and Exact Selection on GPUs,” 2019 IEEE International Parallel and Distributed Processing Symposium Workshops, Rio de Janeiro, Brazil, IEEE, May 2019.  (440.71 KB)
Anzt, H., and G. Flegar, Are we Doing the Right Thing? – A Critical Analysis of the Academic HPC Community,” 2019 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), Rio de Janeiro, Brazil, IEEE, May 2019.  (622.32 KB)
Genet, D., A. Guermouche, and G. Bosilca, Assembly Operations for Multicore Architectures using Task-Based Runtime Systems,” Euro-Par 2014, Porto, Portugal, Springer International Publishing, August 2014.  (481.52 KB)

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