Publications

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Book
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part IV,” Lecture Notes in Computer Science, 1, no. 12140: Springer International Publishing, pp. 668, June 2020. DOI: 10.1007/978-3-030-50423-6
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VI,” Lecture Notes in Computer Science, 1, no. 12142: Springer International Publishing, pp. 667, June 2020. DOI: 10.1007/978-3-030-50433-5
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part I,” Lecture Notes in Computer Science, 1, no. 12137: Springer International Publishing, pp. 707, June 2020. DOI: 10.1007/978-3-030-50371-0
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part III,” Lecture Notes in Computer Science, 1, no. 12139: Springer International Publishing, pp. 648, June 2020. DOI: 10.1007/978-3-030-50420-5
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part V,” Lecture Notes in Computer Science, 1, no. 12141: Springer International Publishing, pp. 618, June 2020. DOI: 10.1007/978-3-030-50426-7
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VII,” Lecture Notes in Computer Science, 1, no. 12143: Springer International Publishing, pp. 775, June 2020. DOI: 10.1007/978-3-030-50436-6
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, “Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part II,” Lecture Notes in Computer Science, 1, no. 12138: Springer International Publishing, pp. 697, June 2020. DOI: 10.1007/978-3-030-50417-5
Snir, M., S. Otto, S. Huss-Lederman, D. Walker, and J. Dongarra, MPI - The Complete Reference, Volume 1: The MPI Core , Second, Cambridge, MA, USA, MIT Press, pp. 426, August 1998.
Dongarra, J., I. Duff, D. Sorensen, and H. van der Vorst, “Numerical Linear Algebra for High-Performance Computers,” Software, Environments and Tools: SIAM, 1998. DOI: 10.1137/1.9780898719611
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, “Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part I,” Lecture Notes in Computer Science, 1, no. 12043: Springer International Publishing, pp. 581, March 2020. DOI: 10.1007/978-3-030-43229-4
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, “Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part II,” Lecture Notes in Computer Science, no. 12044: Springer International Publishing, pp. 503, March 2020. DOI: 10.1007/978-3-030-43222-5
Book Chapter
Abdelfattah, A., S. Tomov, and J. Dongarra, “Batch QR Factorization on GPUs: Design, Optimization, and Tuning,” Lecture Notes in Computer Science, vol. 13350, Cham, Springer International Publishing, June 2022. DOI: 10.1007/978-3-031-08751-6_5
Anzt, H., J. Dongarra, M. Gates, J. Kurzak, P. Luszczek, S. Tomov, and I. Yamazaki, “Bringing High Performance Computing to Big Data Algorithms,” Handbook of Big Data Technologies: Springer, 2017. DOI: 10.1007/978-3-319-49340-4  (1.22 MB)
Beckman, P., J. Dongarra, N. Ferrier, G. Fox, T. Moore, D. Reed, and M. Beck, “Harnessing the Computing Continuum for Programming Our World,” Fog Computing: Theory and Practice: John Wiley & Sons, Inc., 2020. DOI: 10.1002/9781119551713.ch7  (1.4 MB)
Penchoff, D. A., E. Valeev, H. Jagode, P. Luszczek, A. Danalis, G. Bosilca, R. J. Harrison, J. Dongarra, and T. L. Windus, “An Introduction to High Performance Computing and Its Intersection with Advances in Modeling Rare Earth Elements and Actinides,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 3-53, October 2021. DOI: 10.1021/bk-2021-1388.ch001
Conference Paper
Ayala, A., S. Tomov, M. Stoyanov, A. Haidar, and J. Dongarra, “Accelerating Multi - Process Communication for Parallel 3-D FFT,” 2021 Workshop on Exascale MPI (ExaMPI), St. Louis, MO, USA, IEEE, December 2021. DOI: 10.1109/ExaMPI54564.2021.00011
Jagode, H., A. Danalis, G. Bosilca, and J. Dongarra, “Accelerating NWChem Coupled Cluster through dataflow-based Execution,” 11th International Conference on Parallel Processing and Applied Mathematics (PPAM 2015), Krakow, Poland, Springer International Publishing, September 2015.  (452.82 KB)
Dongarra, J., S. Moore, P. Mucci, K. Seymour, and H. You, “Accurate Cache and TLB Characterization Using Hardware Counters,” International Conference on Computational Science (ICCS 2004), Krakow, Poland, Springer, June 2004. DOI: 10.1007/978-3-540-24688-6_57  (167.1 KB)
Luo, X., W. Wu, G. Bosilca, T. Patinyasakdikul, L. Wang, and J. Dongarra, “ADAPT: An Event-Based Adaptive Collective Communication Framework,” The 27th International Symposium on High-Performance Parallel and Distributed Computing (HPDC '18), Tempe, Arizona, ACM Press, June 2018. DOI: 10.1145/3208040.3208054  (493.65 KB)
Yamazaki, I., A. Abdelfattah, A. Ida, S. Ohshima, S. Tomov, R. Yokota, and J. Dongarra, “Analyzing Performance of BiCGStab with Hierarchical Matrix on GPU Clusters,” IEEE International Parallel and Distributed Processing Symposium (IPDPS), Vancouver, BC, Canada, IEEE, May 2018.  (1.37 MB)
Lopez, F., E. Chow, S. Tomov, and J. Dongarra, “Asynchronous SGD for DNN Training on Shared-Memory Parallel Architectures,” Workshop on Scalable Deep Learning over Parallel And Distributed Infrastructures (ScaDL 2020), May 2020.  (188.51 KB)
Barry, D., A. Danalis, and J. Dongarra, “Automated Data Analysis for Defining Performance Metrics from Raw Hardware Events,” 2024 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), San Francisco, CA, USA, IEEE, May 2024. DOI: 10.1109/IPDPSW63119.2024.00134
Yi, Q., K. Kennedy, H. You, K. Seymour, and J. Dongarra, “Automatic Blocking of QR and LU Factorizations for Locality,” 2nd ACM SIGPLAN Workshop on Memory System Performance (MSP 2004), Washington, DC, ACM, June 2004. DOI: 10.1145/1065895.1065898  (212.77 KB)
Mucci, P., J. Dongarra, R. Kufrin, S. Moore, F. Song, and F. Wolf, “Automating the Large-Scale Collection and Analysis of Performance,” 5th LCI International Conference on Linux Clusters: The HPC Revolution, Austin, Texas, May 2004.  (511.6 KB)
Gates, M., J. Kurzak, P. Luszczek, Y. Pei, and J. Dongarra, “Autotuning Batch Cholesky Factorization in CUDA with Interleaved Layout of Matrices,” Parallel and Distributed Processing Symposium Workshops (IPDPSW), Orlando, FL, IEEE, June 2017. DOI: 10.1109/IPDPSW.2017.18
McCraw, H., D. Terpstra, J. Dongarra, K. Davis, and R. Musselman, “Beyond the CPU: Hardware Performance Counter Monitoring on Blue Gene/Q,” International Supercomputing Conference 2013 (ISC'13), Leipzig, Germany, Springer, June 2013.  (624.58 KB)
Davis, J., T. Gao, S. Chandrasekaran, H. Jagode, A. Danalis, P. Balaji, J. Dongarra, and M. Taufer, “Characterization of Power Usage and Performance in Data-Intensive Applications using MapReduce over MPI,” 2019 International Conference on Parallel Computing (ParCo2019), Prague, Czech Republic, September 2019.

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