Publications

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2024
Dongarra, J., and D. Keyes, “The co-evolution of computational physics and high-performance computing,” Nature Reviews Physics, August 2024. DOI: 10.1038/s42254-024-00750-z
Kovalchuk, S. V., C. de Mulatier, V. V. Krzhizhanovskaya, J. Mikyška, M. Paszyński, J. Dongarra, and P. M. A. Sloot, “Computation at the Cutting Edge of Science,” Journal of Computational Science, June 2024. DOI: 10.1016/j.jocs.2024.102379
Abdelfattah, A., N. Beams, R. Carson, P. Ghysels, T. Kolev, T. Stitt, A. Vargas, S. Tomov, and J. Dongarra, “MAGMA: Enabling exascale performance with accelerated BLAS and LAPACK for diverse GPU architectures,” The International Journal of High Performance Computing Applications, June 2024. DOI: 10.1177/10943420241261960
Luszczek, P., A. Castaldo, Y. M. Tsai, D. Mishler, and J. Dongarra, “Numerical eigen-spectrum slicing, accurate orthogonal eigen-basis, and mixed-precision eigenvalue refinement using OpenMP data-dependent tasks and accelerator offload,” The International Journal of High Performance Computing Applications, vol. 303, issue 136, September 2024. DOI: 10.1177/10943420241281050
Hoefler, T., M. Copik, P. Beckman, A. Jones, I. Foster, M. Parashar, D. Reed, M. Troyer, T. Schulthess, D. Ernst, et al., XaaS: Acceleration as a Service to Enable Productive High-Performance Cloud Computing : arXiv, January 2024.
2023
Luszczek, P., W. M. Sid-Lakhdar, and J. Dongarra, “Combining multitask and transfer learning with deep Gaussian processes for autotuning-based performance engineering,” The International Journal of High Performance Computing Applications, March 2023. DOI: 10.1177/10943420231166365
Lindquist, N., P. Luszczek, and J. Dongarra, Generalizing Random Butterfly Transforms to Arbitrary Matrix Sizes : arXiv, December 2023.
Abdelfattah, A., S. Tomov, P. Luszczek, H. Anzt, and J. Dongarra, “GPU-based LU Factorization and Solve on Batches of Matrices with Band Structure,” SC-W 2023: Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis, Denver, CO, ACM, November 2023. DOI: 10.1145/3624062.3624247
Reed, D., D. Gannon, and J. Dongarra, “HPC Forecast: Cloudy and Uncertain,” Communications of the ACM, vol. 66, issue 2, pp. 82 - 90, January 2023. DOI: 10.1145/3552309
Barry, D., H. Jagode, A. Danalis, and J. Dongarra, “Memory Traffic and Complete Application Profiling with PAPI Multi-Component Measurements,” 2023 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), St. Petersburg, Florida, IEEE, August 2023. DOI: 10.1109/IPDPSW59300.2023.00070  (1.81 MB)
Barry, D., H. Jagode, A. Danalis, and J. Dongarra, Memory Traffic and Complete Application Profiling with PAPI Multi-Component Measurements , St. Petersburg, FL, 28th HIPS Workshop, May 2023.  (3.99 MB)
Tsai, Y-H. Mike, N. Beams, and H. Anzt, “Mixed Precision Algebraic Multigrid on GPUs,” Parallel Processing and Applied Mathematics (PPAM 2022), vol. 13826, Cham, Springer International Publishing, April 2023. DOI: 10.1007/978-3-031-30442-2_9
Sid-Lakhdar, W., S. Cayrols, D. Bielich, A. Abdelfattah, P. Luszczek, M. Gates, S. Tomov, H. Johansen, D. Williams-Young, T. Davis, et al., “PAQR: Pivoting Avoiding QR factorization,” 2023 IEEE International Parallel and Distributed Processing Symposium (IPDPS), St. Petersburg, FL, USA, IEEE, 2023. DOI: 10.1109/IPDPS54959.2023.00040
Sukkari, D., M. Gates, M. Al Farhan, H. Anzt, and J. Dongarra, “Task-Based Polar Decomposition Using SLATE on Massively Parallel Systems with Hardware Accelerators,” SC-W '23: Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, Network, Storage, and Analysis, Denver, CO, ACM, November 2023. DOI: 10.1145/3624062.3624248
Lindquist, N., P. Luszczek, and J. Dongarra, “Using Additive Modifications in LU Factorization Instead of Pivoting,” 37th ACM International Conference on Supercomputing (ICS'23), Orlando, FL, ACM, June 2023. DOI: 10.1145/3577193.3593731  (624.18 KB)
2022
Abdulah, S., Q. Cao, Y. Pei, G. Bosilca, J. Dongarra, M. G. Genton, D. E. Keyes, H. Ltaief, and Y. Sun, “Accelerating Geostatistical Modeling and Prediction With Mixed-Precision Computations: A High-Productivity Approach With PaRSEC,” IEEE Transactions on Parallel and Distributed Systems, vol. 33, issue 4, pp. 964 - 976, April 2022. DOI: 10.1109/TPDS.2021.3084071
Abdelfattah, A., P. Ghysels, W. Boukaram, S. Tomov, X. Sherry Li, and J. Dongarra, “Addressing Irregular Patterns of Matrix Computations on GPUs and Their Impact on Applications Powered by Sparse Direct Solvers,” 2022 International Conference for High Performance Computing, Networking, Storage and Analysis (SC22), Dallas, TX, IEEE Computer Society, pp. 354-367, November 2022.  (1.57 MB)
Ayala, A., S. Tomov, P. Luszczek, S. Cayrols, G. Ragghianti, and J. Dongarra, “Analysis of the Communication and Computation Cost of FFT Libraries towards Exascale,” ICL Technical Report, no. ICL-UT-22-07: Innovative Computing Laboratory, July 2022.  (5.91 MB)
Abdelfattah, A., S. Tomov, and J. Dongarra, “Batch QR Factorization on GPUs: Design, Optimization, and Tuning,” Lecture Notes in Computer Science, vol. 13350, Cham, Springer International Publishing, June 2022. DOI: 10.1007/978-3-031-08751-6_5
Alomairy, R., M. Gates, S. Cayrols, D. Sukkari, K. Akbudak, A. YarKhan, P. Bagwell, and J. Dongarra, “Communication Avoiding LU with Tournament Pivoting in SLATE,” SLATE Working Notes, no. 18, ICL-UT-22-01, January 2022.  (3.74 MB)
Bosilca, G., A. Bouteiller, T. Herault, V. Le Fèvre, Y. Robert, and J. Dongarra, “Comparing Distributed Termination Detection Algorithms for Modern HPC Platforms,” International Journal of Networking and Computing, vol. 12, issue 1, pp. 26 - 46, January 2022. DOI: 10.15803/ijnc.12.1_26
Kovalchuk, S. V., V. V. Krzhizhanovskaya, M. Paszyński, D. Kranzlmüller, J. Dongarra, and P. M. A. Sloot, “Computational science for a better future,” Journal of Computational Science, vol. 62, pp. 101745, July 2022. DOI: 10.1016/j.jocs.2022.101745
Sid-Lakhdar, W. M., M. Aznaveh, P. Luszczek, and J. Dongarra, “Deep Gaussian process with multitask and transfer learning for performance optimization,” 2022 IEEE High Performance Extreme Computing Conference (HPEC), pp. 1-7, September 2022. DOI: 10.1109/HPEC55821.2022.9926396
Cao, Q., G. Bosilca, N. Losada, W. Wu, D. Zhong, and J. Dongarra, “Evaluating Data Redistribution in PaRSEC,” IEEE Transactions on Parallel and Distributed Systems, vol. 33, no. 8, pp. 1856-1872, August 2022. DOI: 10.1109/TPDS.2021.3131657  (3.19 MB)
Dongarra, J., “The evolution of mathematical software,” Communications of the ACM, vol. 65227, issue 12, pp. 66 - 72, December 2022. DOI: 10.1145/3554977
Ayala, A., S. Tomov, P. Luszczek, S. Cayrols, G. Ragghianti, and J. Dongarra, “FFT Benchmark Performance Experiments on Systems Targeting Exascale,” ICL Technical Report, no. ICL-UT-22-02, March 2022.  (5.87 MB)
Cao, Q., R. Alomairy, Y. Pei, G. Bosilca, H. Ltaief, D. Keyes, and J. Dongarra, “A Framework to Exploit Data Sparsity in Tile Low-Rank Cholesky Factorization,” IEEE International Parallel and Distributed Processing Symposium (IPDPS), July 2022. DOI: 10.1109/IPDPS53621.2022.00047  (1.03 MB)
Cayrols, S., J. Li, G. Bosilca, S. Tomov, A. Ayala, and J. Dongarra, “Lossy all-to-all exchange for accelerating parallel 3-D FFTs on hybrid architectures with GPUs,” 2022 IEEE International Conference on Cluster Computing (CLUSTER), pp. 152-160, September 2022. DOI: 10.1109/CLUSTER51413.2022.00029
Cayrols, S., J. Li, G. Bosilca, S. Tomov, A. Ayala, and J. Dongarra, “Mixed precision and approximate 3D FFTs: Speed for accuracy trade-off with GPU-aware MPI and run-time data compression,” ICL Technical Report, no. ICL-UT-22-04, May 2022.  (706.14 KB)
Sid-Lakhdar, W. M., S. Cayrols, D. Bielich, A. Abdelfattah, P. Luszczek, M. Gates, S. Tomov, H. Johansen, D. Williams-Young, T. A. Davis, et al., “PAQR: Pivoting Avoiding QR factorization,” ICL Technical Report, no. ICL-UT-22-06, June 2022.  (364.85 KB)
Ayala, A., S. Tomov, M. Stoyanov, A. Haidar, and J. Dongarra, “Performance Analysis of Parallel FFT on Large Multi-GPU Systems,” 2022 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW), Lyon, France, IEEE, August 2022. DOI: 10.1109/IPDPSW55747.2022.00072
Murray, R., J. Demmel, M. W. Mahoney, B. N. Erichson, M. Melnichenko, O. Asif Malik, L. Grigori, P. Luszczek, M. Dereziński, M. E. Lopes, et al., “Randomized Numerical Linear Algebra: A Perspective on the Field with an Eye to Software,” University of California, Berkeley EECS Technical Report, no. UCB/EECS-2022-258: University of California, Berkeley, November 2022. DOI: 10.48550/arXiv.2302.11474  (1.05 MB) (1.54 MB)
Reed, D., D. Gannon, and J. Dongarra, “Reinventing High Performance Computing: Challenges and Opportunities,” ICL Technical Report, no. ICL-UT-22-03, March 2022.  (1.36 MB)
Dongarra, J., and A. Geist, “Report on the Oak Ridge National Laboratory's Frontier System,” ICL Technical Report, no. ICL-UT-22-05, May 2022.  (16.87 MB)
Cao, Q., S. Abdulah, R. Alomairy, Y. Pei, P. Nag, G. Bosilca, J. Dongarra, M. G. Genton, D. Keyes, H. Ltaief, et al., “Reshaping Geostatistical Modeling and Prediction for Extreme-Scale Environmental Applications,” 2022 International Conference for High Performance Computing, Networking, Storage and Analysis (SC22), Dallas, TX, IEEE Press, November 2022.
Lindquist, N., M. Gates, P. Luszczek, and J. Dongarra, “Threshold Pivoting for Dense LU Factorization,” ScalAH22: 13th Workshop on Latest Advances in Scalable Algorithms for Large-Scale Heterogeneous Systems , Dallas, Texas, IEEE, November 2022. DOI: 10.1109/ScalAH56622.2022.00010  (721.77 KB)
Zhong, D., Q. Cao, G. Bosilca, and J. Dongarra, “Using long vector extensions for MPI reductions,” Parallel Computing, vol. 109, pp. 102871, March 2022. DOI: 10.1016/j.parco.2021.102871
2021
Kovalchuk, S. V., V. V. Krzhizhanovskaya, PMA. Sloot, G. Závodszky, M. H. Lees, M. Paszyński, and J. Dongarra, “20 years of computational science: Selected papers from 2020 International Conference on Computational Science,” Journal of Computational Science, vol. 53, pp. 101395–101395, 2021. DOI: 10.1016/j.jocs.2021.101395
Ayala, A., S. Tomov, A. Haidar, M. Stoyanov, S. Cayrols, J. Li, G. Bosilca, and J. Dongarra, Accelerating FFT towards Exascale Computing : NVIDIA GPU Technology Conference (GTC2021), 2021.  (27.23 MB)
Ayala, A., S. Tomov, M. Stoyanov, A. Haidar, and J. Dongarra, “Accelerating Multi - Process Communication for Parallel 3-D FFT,” 2021 Workshop on Exascale MPI (ExaMPI), St. Louis, MO, USA, IEEE, December 2021. DOI: 10.1109/ExaMPI54564.2021.00011
Lindquist, N., P. Luszczek, and J. Dongarra, “Accelerating Restarted GMRES with Mixed Precision Arithmetic,” IEEE Transactions on Parallel and Distributed Systems, June 2021. DOI: 10.1109/TPDS.2021.3090757  (572.4 KB)
Herault, T., Y. Robert, G. Bosilca, R. Harrison, C. Lewis, E. Valeev, and J. Dongarra, “Distributed-Memory Multi-GPU Block-Sparse Tensor Contraction for Electronic Structure,” 35th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2021), Portland, OR, IEEE, May 2021.
Bosilca, G., T. Herault, and J. Dongarra, DTE: PaRSEC Enabled Libraries and Applications : 2021 Exascale Computing Project Annual Meeting, April 2021.  (3.24 MB)
Kolev, T., P. Fischer, M. Min, J. Dongarra, J. Brown, V. Dobrev, T. Warburton, S. Tomov, M. S. Shephard, A. Abdelfattah, et al., “Efficient exascale discretizations: High-order finite element methods,” The International Journal of High Performance Computing Applications, pp. 10943420211020803, 2021. DOI: 10.1177/10943420211020803
Iqbal, Z., S. Nooshabadi, I. Yamazaki, S. Tomov, and J. Dongarra, “Exploiting Block Structures of KKT Matrices for Efficient Solution of Convex Optimization Problems,” IEEE Access, 2021. DOI: 10.1109/ACCESS.2021.3106054  (1.35 MB)
Ayala, A., S. Tomov, P. Luszczek, S. Cayrols, G. Ragghianti, and J. Dongarra, “Interim Report on Benchmarking FFT Libraries on High Performance Systems,” Innovative Computing Laboratory Technical Report, no. ICL-UT-21-03: University of Tennessee, July 2021.  (2.68 MB)
Penchoff, D. A., E. Valeev, H. Jagode, P. Luszczek, A. Danalis, G. Bosilca, R. J. Harrison, J. Dongarra, and T. L. Windus, “An Introduction to High Performance Computing and Its Intersection with Advances in Modeling Rare Earth Elements and Actinides,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 3-53, October 2021. DOI: 10.1021/bk-2021-1388.ch001
Cao, Q., Y. Pei, K. Akbudak, G. Bosilca, H. Ltaief, D. Keyes, and J. Dongarra, “Leveraging PaRSEC Runtime Support to Tackle Challenging 3D Data-Sparse Matrix Problems,” 35th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2021), Portland, OR, IEEE, May 2021.  (1.08 MB)
Tsai, Y. M., P. Luszczek, and J. Dongarra, “Mixed-Precision Algorithm for Finding Selected Eigenvalues and Eigenvectors of Symmetric and Hermitian Matrices,” ICL Technical Report, no. ICL-UT-21-05, August 2021.  (3.93 MB)
Sharp, D., M. Stoyanov, S. Tomov, and J. Dongarra, “A More Portable HeFFTe: Implementing a Fallback Algorithm for Scalable Fourier Transforms,” ICL Technical Report, no. ICL-UT-21-04: University of Tennessee, August 2021.  (493.17 KB)

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