Publications

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Book
Dongarra, J., I. Duff, D. Sorensen, and H. van der Vorst, “Numerical Linear Algebra for High-Performance Computers,” Software, Environments and Tools: SIAM, 1998.
Book Chapter
Penchoff, D. A., E. Valeev, H. Jagode, P. Luszczek, A. Danalis, G. Bosilca, R. J. Harrison, J. Dongarra, and T. L. Windus, “An Introduction to High Performance Computing and Its Intersection with Advances in Modeling Rare Earth Elements and Actinides,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 3-53, October 2021.
Vetter, J., R. Glassbrook, K. Schwan, S. Yalamanchili, M. Horton, A. Gavrilovska, M. Slawinska, J. Dongarra, J. Meredith, P. Roth, et al., “Keeneland: Computational Science Using Heterogeneous GPU Computing,” Contemporary High Performance Computing: From Petascale Toward Exascale, Boca Raton, FL, Taylor and Francis, 2013.  (2.7 MB)
Conference Paper
Thiyagalingam, J., G. von Laszewski, J. Yin, M. Emani, J. Papay, G. Barrett, P. Luszczek, A. Tsaris, C. Kirkpatrick, F. Wang, et al., “AI Benchmarking for Science: Efforts from the MLCommons Science Working Group,” Lecture Notes in Computer Science, vol. 13387: Springer International Publishing, pp. 47 - 64, January 2023.
Thiyagalingam, J., G. von Laszewski, J. Yin, M. Emani, J. Papay, G. Barrett, P. Luszczek, A. Tsaris, C. Kirkpatrick, F. Wang, et al., “AI Benchmarking for Science: Efforts from the MLCommons Science Working Group,” Lecture Notes in Computer Science, vol. 13387: Springer International Publishing, pp. 47 - 64, January 2023.
Aupy, G., Y. Robert, and F. Vivien, “Assuming failure independence: are we right to be wrong?,” The 3rd International Workshop on Fault Tolerant Systems (FTS), Honolulu, Hawaii, IEEE, September 2017.  (597.11 KB)
Han, L., L-C. Canon, H. Casanova, Y. Robert, and F. Vivien, “Checkpointing Workflows for Fail-Stop Errors,” IEEE Cluster, Honolulu, Hawaii, IEEE, September 2017.  (400.64 KB)
Herault, T., J. Schuchart, E. F. Valeev, and G. Bosilca, “Composition of Algorithmic Building Blocks in Template Task Graphs,” 2022 IEEE/ACM Parallel Applications Workshop: Alternatives To MPI+X (PAW-ATM), Dallas, TX, USA, IEEE, January 2023, 2022.  (1015.99 KB)
Dongarra, J., S. Hammarling, N. J. Higham, S. Relton, P. Valero-Lara, and M. Zounon, “The Design and Performance of Batched BLAS on Modern High-Performance Computing Systems,” International Conference on Computational Science (ICCS 2017), Zürich, Switzerland, Elsevier, June 2017.  (446.14 KB)
Marin, G., C. McCurdy, and J. Vetter, “Diagnosis and Optimization of Application Prefetching Performance,” Proceedings of the 27th ACM International Conference on Supercomputing (ICS '13), Eugene, Oregon, USA, ACM Press, June 2013.  (827.31 KB)
Herault, T., Y. Robert, G. Bosilca, R. Harrison, C. Lewis, E. Valeev, and J. Dongarra, “Distributed-Memory Multi-GPU Block-Sparse Tensor Contraction for Electronic Structure,” 35th IEEE International Parallel & Distributed Processing Symposium (IPDPS 2021), Portland, OR, IEEE, May 2021.
Zhao, Y., L. Wan, W. Wu, G. Bosilca, R. Vuduc, J. Ye, W. Tang, and Z. Xu, “Efficient Communications in Training Large Scale Neural Networks,” ACM MultiMedia Workshop 2017, Mountain View, CA, ACM, October 2017.  (1.41 MB)
Han, L., Y. Gao, J. Liu, Y. Robert, and F. Vivien, “Energy-Aware Strategies for Reliability-Oriented Real-Time Task Allocation on Heterogeneous Platforms,” 49th International Conference on Parallel Processing (ICPP 2020), Edmonton, AB, Canada, ACM Press, 2020.  (804.96 KB)
Schuchart, J., P. Nookala, M. Mahdi Javanmard, T. Herault, E. F. Valeev, G. Bosilca, and R. J. Harrison, “Generalized Flow-Graph Programming Using Template Task-Graphs: Initial Implementation and Assessment,” 2022 IEEE International Parallel and Distributed Processing Symposium (IPDPS), Lyon, France, IEEE, July 2022.
Han, L., V. Le Fèvre, L-C. Canon, Y. Robert, and F. Vivien, “A Generic Approach to Scheduling and Checkpointing Workflows,” The 47th International Conference on Parallel Processing (ICPP 2018), Eugene, OR, IEEE Computer Society Press, August 2018.  (737.11 KB)
Wu, W., G. Bosilca, R. vandeVaart, S. Jeaugey, and J. Dongarra, “GPU-Aware Non-contiguous Data Movement In Open MPI,” 25th International Symposium on High-Performance Parallel and Distributed Computing (HPDC'16), Kyoto, Japan, ACM, June 2016.  (482.32 KB)
Han, L., L-C. Canon, J. Liu, Y. Robert, and F. Vivien, “Improved Energy-Aware Strategies for Periodic Real-Time Tasks under Reliability Constraints,” 40th IEEE Real-Time Systems Symposium (RTSS 2019), York, UK, IEEE Press, February 2020.
Haidar, A., H. Jagode, A. YarKhan, P. Vaccaro, S. Tomov, and J. Dongarra, “Power-aware Computing: Measurement, Control, and Performance Analysis for Intel Xeon Phi,” 2017 IEEE High Performance Extreme Computing Conference (HPEC'17), Best Paper Finalist, Waltham, MA, IEEE, September 2017.  (908.84 KB)
Schuchart, J., P. Nookala, T. Herault, E. F. Valeev, and G. Bosilca, “Pushing the Boundaries of Small Tasks: Scalable Low-Overhead Data-Flow Programming in TTG,” 2022 IEEE International Conference on Cluster Computing (CLUSTER), Heidelberg, Germany, IEEE, September 2022.
Gao, Y., L-C. Canon, Y. Robert, and F. Vivien, “Scheduling Independent Stochastic Tasks on Heterogeneous Cloud Platforms,” IEEE Cluster 2019, Albuquerque, New Mexico, IEEE Computer Society Press, September 2019.  (651 KB)
Bosilca, G., R. Harrison, T. Herault, M. Mahdi Javanmard, P. Nookala, and E. Valeev, “The Template Task Graph (TTG) - An Emerging Practical Dataflow Programming Paradigm for Scientific Simulation at Extreme Scale,” 2020 IEEE/ACM 5th International Workshop on Extreme Scale Programming Models and Middleware (ESPM2): IEEE, November 2020.  (139.6 KB)
Barbut, Q., A. Benoit, T. Herault, Y. Robert, and F. Vivien, “When to checkpoint at the end of a fixed-length reservation?,” Fault Tolerance for HPC at eXtreme Scales (FTXS) Workshop, Denver, United States, August 2023.
Conference Proceedings
Haidar, A., L. Giraud, H. Ben-Hadj-Ali, F. Sourbier, S. Operto, and J. Virieux, “3-D parallel frequency-domain visco-acoustic wave modelling based on a hybrid direct/iterative solver,” 73rd EAGE Conference & Exhibition incorporating SPE EUROPEC 2011, Vienna, Austria, 23-26 May, 00 2011.
Vadhiyar, S., G. Fagg, and J. Dongarra, “Automatically Tuned Collective Communications,” Proceedings of SuperComputing 2000 (SC'2000), Dallas, TX, November 2000.  (232.69 KB)
Danalis, A., P. Luszczek, G. Marin, J. Vetter, and J. Dongarra, “BlackjackBench: Hardware Characterization with Portable Micro-Benchmarks and Automatic Statistical Analysis of Results,” IEEE International Parallel and Distributed Processing Symposium (submitted), Anchorage, AK, May 2011.
Benoit, A., Y. Du, T. Herault, L. Marchal, G. Pallez, L. Perotin, Y. Robert, H. Sun, and F. Vivien, “Checkpointing à la Young/Daly: An Overview,” IC3-2022: Proceedings of the 2022 Fourteenth International Conference on Contemporary Computing, Noida, India, ACM Press, pp. 701-710, August 2022.  (639.77 KB)
Roche, K., and J. Dongarra, “Deploying Parallel Numerical Library Routines to Cluster Computing in a Self Adapting Fashion,” Parallel Computing: Advances and Current Issues:Proceedings of the International Conference ParCo2001, London, England, Imperial College Press, January 2002.  (381.89 KB)
Bouteiller, A., S. Pophale, S. Boehm, M. B. Baker, and M G. Venkata, “Evaluating Contexts in OpenSHMEM-X Reference Implementation,” OpenSHMEM and Related Technologies. Big Compute and Big Data Convergence, Cham, Springer International Publishing, pp. 50–62, 2018.
Bouteiller, A., S. Pophale, S. Boehm, M. B. Baker, and M G. Venkata, “Evaluating Contexts in OpenSHMEM-X Reference Implementation,” OpenSHMEM and Related Technologies. Big Compute and Big Data Convergence, Cham, Springer International Publishing, pp. 50–62, 2018.
Gao, Y., G. Pallez, Y. Robert, and F. Vivien, “Evaluating Task Dropping Strategies for Overloaded Real-Time Systems (Work-In-Progress),” 42nd Real Time Systems Symposium (RTSS): IEEE Computer Society Press, 2021.  (217.13 KB)
Tang, C., A. Bouteiller, T. Herault, M G. Venkata, and G. Bosilca, “From MPI to OpenSHMEM: Porting LAMMPS,” OpenSHMEM and Related Technologies. Experiences, Implementations, and Technologies, Annapolis, MD, USA, Springer International Publishing, pp. 121–137, 2015.
Tang, C., A. Bouteiller, T. Herault, M G. Venkata, and G. Bosilca, “From MPI to OpenSHMEM: Porting LAMMPS,” OpenSHMEM and Related Technologies. Experiences, Implementations, and Technologies, Annapolis, MD, USA, Springer International Publishing, pp. 121–137, 2015.
Vadhiyar, S., J. Dongarra, and A. YarKhan, “GrADSolve - RPC for High Performance Computing on the Grid,” Lecture Notes in Computer Science, Proceedings of the 9th International Euro-Par Conference, vol. 2790, Klagenfurt, Austria, Springer-Verlag, Berlin, pp. 394-403, January 2003.  (125.96 KB)
Jagode, H., J. Dongarra, S. Alam, J. Vetter, W.. Spear, and A. D. Malony, “A Holistic Approach for Performance Measurement and Analysis for Petascale Applications,” ICCS 2009 Joint Workshop: Tools for Program Development and Analysis in Computational Science and Software Engineering for Large-Scale Computing, vol. 2009, Baton Rouge, Louisiana, Springer-Verlag Berlin Heidelberg 2009, pp. 686-695, May 2009.  (3.96 MB)
Canning, A., J. Dongarra, J. Langou, O. Marques, S. Tomov, C. Voemel, and L-W. Wang, “Interior State Computation of Nano Structures,” PARA 2008, 9th International Workshop on State-of-the-Art in Scientific and Parallel Computing, Trondheim, Norway, May 2008.  (137.12 KB)
Dongarra, J., J-F. Pineau, Y. Robert, and F. Vivien, “Matrix Product on Heterogeneous Master Worker Platforms,” 2008 PPoPP Conference, Salt Lake City, Utah, January 2008.
Vadhiyar, S., and J. Dongarra, “A Metascheduler For The Grid,” Proceedings of the 11th IEEE International Symposium on High Performance Distributed Computing (HPDC 2002), Edinburgh, Scotland, IEEE Computer Society, pp. 343-351, July 2002.  (99.53 KB)
Angskun, T., G. Bosilca, B. Vander Zanden, and J. Dongarra, “Optimal Routing in Binomial Graph Networks,” The International Conference on Parallel and Distributed Computing, applications and Technologies (PDCAT), Adelaide, Australia, IEEE Computer Society, December 2007.
Canning, A., J. Dongarra, J. Langou, O. Marques, S. Tomov, C. Voemel, and L-W. Wang, “Performance evaluation of eigensolvers in nano-structure computations,” IEEE/ACM Proceedings of HPCNano SC06 (to appear), January 2006.  (120.61 KB)
Vadhiyar, S., G. Fagg, and J. Dongarra, “Performance Modeling for Self Adapting Collective Communications for MPI,” LACSI Symposium 2001, Santa Fe, NM, October 2001.  (105.49 KB)
Vadhiyar, S., “A Performance Oriented Migration Framework for the Grid,” Proceedings of the 3rd International Symposium on Cluster Computing and the Grid, Tokyo, Japan, pp. 130-137, May 2003.  (113.6 KB)
Demmel, J., J. Dongarra, V. Eijkhout, E. Fuentes, A. Petitet, R. Vuduc, C. Whaley, and K. Yelick, “Self Adapting Linear Algebra Algorithms and Software,” IEEE Proceedings (to appear), 00 2004.  (587.67 KB)
Bouteiller, A., G. Bosilca, and M G. Venkata, “Surviving Errors with OpenSHMEM,” OpenSHMEM and Related Technologies. Enhancing OpenSHMEM for Hybrid Environments, Baltimore, MD, USA, Springer International Publishing, pp. 66–81, 2016.
Bouteiller, A., G. Bosilca, and M G. Venkata, “Surviving Errors with OpenSHMEM,” OpenSHMEM and Related Technologies. Enhancing OpenSHMEM for Hybrid Environments, Baltimore, MD, USA, Springer International Publishing, pp. 66–81, 2016.
Kennedy, K., J. Mellor-Crummey, K. Cooper, L. Torczon, F. Berman, A. Chien, D. Angulo, I. Foster, D. Gannon, L. Johnsson, et al., “Toward a Framework for Preparing and Executing Adaptive Grid Programs,” International Parallel and Distributed Processing Symposium: IPDPS 2002 Workshops, Fort Lauderdale, FL, pp. 0171, April 2002.  (64.5 KB)
Canning, A., J. Dongarra, J. Langou, O. Marques, S. Tomov, C. Voemel, and L-W. Wang, “Towards bulk based preconditioning for quantum dot computations,” IEEE/ACM Proceedings of HPCNano SC06 (to appear), January 2006.  (172.46 KB)
Shamis, P.., M G. Venkata, M. G. Lopez, M.. B. Baker, O.. Hernandez, Y.. Itigin, M.. Dubman, G.. Shainer, R.. L. Graham, L.. Liss, et al., “UCX: An Open Source Framework for HPC Network APIs and Beyond,” 2015 IEEE 23rd Annual Symposium on High-Performance Interconnects, Santa Clara, CA, USA, IEEE, pp. 40-43, 2015.
Journal Article
Demmel, J., J. Dongarra, A. Fox, S. Williams, V. Volkov, and K. Yelick, “Accelerating Time-To-Solution for Computational Science and Engineering,” SciDAC Review, 00 2009.  (739.11 KB)
Boulet, P., J. Dongarra, F. Rastello, Y. Robert, and F. Vivien, “Algorithmic Issues on Heterogeneous Computing Platforms,” Parallel Processing Letters, vol. 9, no. 2, pp. 197-213, January 1999.  (301.17 KB)
Balaprakash, P., J. Dongarra, T. Gamblin, M. Hall, J. Hollingsworth, B. Norris, and R. Vuduc, “Autotuning in High-Performance Computing Applications,” Proceedings of the IEEE, vol. 106, issue 11, pp. 2068–2083, November 2018.  (2.5 MB)

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