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2006

Zunger, A., A. Franceschetti, G. Bester, W. B. Jones, K. Kim, P. A. Graf, L-W. Wang, A. Canning, O. Marques, C. Voemel, et al., “Predicting the electronic properties of 3D, million-atom semiconductor nanostructure architectures,” J. Phys.: Conf. Ser. 46, vol. :101088/1742-6596/46/1/040, pp. 292-298, January 2006.

(644.1 KB)

Tang, Y., G. Fagg, and J. Dongarra, “Proposal of MPI operation level Checkpoint/Rollback and one implementation,” Proceedings of IEEE CCGrid 2006: IEEE Computer Society, January 2006.

(277.27 KB)

Angskun, T., G. Fagg, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Scalable Fault Tolerant Protocol for Parallel Runtime Environments,” 2006 Euro PVM/MPI, no. ICL-UT-06-12, Bonn, Germany, 00 2006.

(149.07 KB)

Bosilca, G., Z. Chen, J. Dongarra, V. Eijkhout, G. Fagg, E. Fuentes, J. Langou, P. Luszczek, J. Pjesivac–Grbovic, K. Seymour, et al., “Self Adapting Numerical Software SANS Effort,” IBM Journal of Research and Development, vol. 50, no. 2/3, pp. 223-238, January 2006.

(357.53 KB)

Bosilca, G., Z. Chen, J. Dongarra, V. Eijkhout, G. Fagg, E. Fuentes, J. Langou, P. Luszczek, J. Pjesivac–Grbovic, K. Seymour, et al., “Self Adapting Numerical Software SANS Effort,” IBM Journal of Research and Development, vol. 50, no. 2/3, pp. 223-238, January 2006.

(357.53 KB)

Angskun, T., G. Fagg, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Self-Healing Network for Scalable Fault Tolerant Runtime Environments,” DAPSYS 2006, 6th Austrian-Hungarian Workshop on Distributed and Parallel Systems, Innsbruck, Austria, January 2006.

(162.83 KB)

2005

Eijkhout, V., E. Fuentes, T. Eidson, and J. Dongarra, “The Component Structure of a Self-Adapting Numerical Software System,” International Journal of Parallel Programming, vol. 33, no. 2, June 2005.

(64.88 KB)

Cronk, D., G. Fagg, S. Emeny, and S. Tucker, “Dynamic Process Management for Pipelined Applications,” Proceedings of DoD HPCMP UGC 2005 (to appear), Nashville, TN, IEEE, January 2005.

Chen, Z., G. Fagg, E. Gabriel, J. Langou, T. Angskun, G. Bosilca, and J. Dongarra, “Fault Tolerant High Performance Computing by a Coding Approach,” Proceedings of ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming (to appear), Chicago, Illinois, January 2005.

(209.37 KB)

Bosilca, G., J. Dongarra, G. Fagg, and J. Langou, “Hash Functions for Datatype Signatures in MPI,” Proceedings of 12th European Parallel Virtual Machine and Message Passing Interface Conference - Euro PVM/MPI, vol. 3666, Sorrento (Naples), Italy, Springer-Verlag Berlin, pp. 76-83, September 2005.

(304.2 KB)

Jones, W. B., G. Bester, A. Canning, A. Franceschetti, P. A. Graf, K. Kim, J. Langou, L-W. Wang, J. Dongarra, and A. Zunger, “NanoPSE: A Nanoscience Problem Solving Environment for Atomistic Electronic Structure of Semiconductor Nanostructures,” Journal of Physics: Conference Series, issue 16, pp. 277-282, June 2005.

(476.64 KB)

Pjesivac–Grbovic, J., T. Angskun, G. Bosilca, G. Fagg, E. Gabriel, and J. Dongarra, “Performance Analysis of MPI Collective Operations,” Cluster Computing Journal (to appear), January 2005.

(1018.28 KB)

Pjesivac–Grbovic, J., T. Angskun, G. Bosilca, G. Fagg, E. Gabriel, and J. Dongarra, “Performance Analysis of MPI Collective Operations,” 4th International Workshop on Performance Modeling, Evaluation, and Optmization of Parallel and Distributed Systems (PMEO-PDS '05), Denver, Colorado, April 2005.

(1018.28 KB)

Fagg, G., T. Angskun, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Scalable Fault Tolerant MPI: Extending the Recovery Algorithm,” Proceedings of 12th European Parallel Virtual Machine and Message Passing Interface Conference - Euro PVM/MPI, vol. 3666, Sorrento (Naples) , Italy, Springer-Verlag Berlin, pp. 67, September 2005.

(144.86 KB)

Vadhiyar, S., G. Fagg, and J. Dongarra, “Towards an Accurate Model for Collective Communications,” ICL Technical Report, no. ICL-UT-05-03, January 2005.

(250.73 KB)

2004

Emad, N., S. A. S. Fazeli, and J. Dongarra, “An Asynchronous Algorithm on NetSolve Global Computing System,” PRiSM - Laboratoire de recherche en informatique, Université de Versailles St-Quentin Technical Report, March 2004.

(377.33 KB)

Fagg, G., and J. Dongarra, “Building and using a Fault Tolerant MPI implementation,” International Journal of High Performance Applications and Supercomputing (to appear), 00 2004.

Agarwal, P., R. A.. Alexander, E.. Apra, S. Balay, A. S. Bland, J. Colgan, E. D'Azevedo, J. Dongarra, T. Dunigan, M. Fahey, et al., “Cray X1 Evaluation Status Report,” Oak Ridge National Laboratory Report, vol. /-2004/13, January 2004.

(817.33 KB)

Fagg, G., E. Gabriel, G. Bosilca, T. Angskun, Z. Chen, J. Pjesivac–Grbovic, K. London, and J. Dongarra, “Extending the MPI Specification for Process Fault Tolerance on High Performance Computing Systems,” Proceedings of ISC2004 (to appear), Heidelberg, Germany, June 2004.

(548.38 KB)

Buttari, A., V. Eijkhout, J. Langou, and S. Filippone, “Performance Optimization and Modeling of Blocked Sparse Kernels,” ICL Technical Report, no. ICL-UT-04-05, 00 2004.

(229.58 KB)

Fagg, G., E. Gabriel, Z. Chen, T. Angskun, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Process Fault-Tolerance: Semantics, Design and Applications for High Performance Computing,” International Journal for High Performance Applications and Supercomputing (to appear), April 2004.

(186.9 KB)

Demmel, J., J. Dongarra, V. Eijkhout, E. Fuentes, A. Petitet, R. Vuduc, C. Whaley, and K. Yelick, “Self Adapting Linear Algebra Algorithms and Software,” IEEE Proceedings (to appear), 00 2004.

(587.67 KB)

Vadhiyar, S., G. Fagg, and J. Dongarra, “Towards an Accurate Model for Collective Communications,” International Journal of High Performance Applications, Special Issue: Automatic Performance Tuning, vol. 18, no. 1, pp. 159-167, January 2004.

(250.73 KB)

Casanova, H., T. Bartol, F. Berman, A. Birnbaum, J. Dongarra, M. Ellisman, M. Faerman, E. Gockay, M. Miller, G. Obertelli, et al., “The Virtual Instrument: Support for Grid-enabled Scientific Simulations,” International Journal of High Performance Computing Applications, vol. 18, no. 1, pp. 3-17, January 2004.

(282.16 KB)

2003

Gabriel, E., G. Fagg, and J. Dongarra, “Evaluating The Performance Of MPI-2 Dynamic Communicators And One-Sided Communication,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface, 10th European PVM/MPI User's Group Meeting, vol. 2840, Venice, Italy, Springer-Verlag, Berlin, pp. 88-97, September 2003.

(254.08 KB)

Fagg, G., E. Gabriel, Z. Chen, T. Angskun, G. Bosilca, A. Bukovsky, and J. Dongarra, “Fault Tolerant Communication Library and Applications for High Performance Computing,” Los Alamos Computer Science Institute (LACSI) Symposium 2003 (presented), Santa Fe, NM, October 2003.

(146.05 KB)

Gabriel, E., G. Fagg, A. Bukovsky, T. Angskun, and J. Dongarra, “A Fault-Tolerant Communication Library for Grid Environments,” 17th Annual ACM International Conference on Supercomputing (ICS'03) International Workshop on Grid Computing and e-Science, San Francisco, June 2003.

(377.14 KB)

Agrawal, S., J. Dongarra, K. Seymour, and S. Vadhiyar, “NetSolve: Past, Present, and Future - A Look at a Grid Enabled Server,” Making the Global Infrastructure a Reality: Wiley Publishing, 00 2003.

(158.19 KB)

Eijkhout, V., and E. Fuentes, “A Proposed Standard for Matrix Metadata,” Innovative Computing Laboratory Technical Report, no. ICL-UT-03-02, Submitted to ACM TOMS, November 2003.

(13.39 KB)

Dail, H., O. Sievert, F. Berman, H. Casanova, A. YarKhan, S. Vadhiyar, J. Dongarra, C. Liu, L. Yang, D. Angulo, et al., “Scheduling in the Grid Application Development Software Project,” Resource Management in the Grid: Kluwer Publishers, March 2003.

(375.92 KB)

2002

Fagg, G., and J. Dongarra, “HARNESS Fault Tolerant MPI Design, Usage and Performance Issues,” Future Generation Computer Systems, vol. 18, no. 8, pp. 1127-1142, January 2002.

(403.41 KB)

Bassi, A., M. Beck, G. Fagg, T. Moore, J. Plank, M. Swany, and R. Wolski, “The Internet BackPlane Protocol: A Study in Resource Sharing,” Proceedings of the second IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGRID 2002), Berlin, Germany, October 2002.

Kennedy, K., J. Mellor-Crummey, K. Cooper, L. Torczon, F. Berman, A. Chien, D. Angulo, I. Foster, D. Gannon, L. Johnsson, et al., “Toward a Framework for Preparing and Executing Adaptive Grid Programs,” International Parallel and Distributed Processing Symposium: IPDPS 2002 Workshops, Fort Lauderdale, FL, pp. 0171, April 2002.

(64.5 KB)

Casanova, H., T. Bartol, F. Berman, A. Birnbaum, J. Dongarra, M. Ellisman, M. Faerman, E. Gockay, M. Miller, G. Obertelli, et al., “The Virtual Instrument: Support for Grid-enabled Scientific Simulations,” Journal of Parallel and Distributed Computing (submitted), October 2002.

(282.16 KB)

2001

Fagg, G., A. Bukovsky, and J. Dongarra, “Fault Tolerant MPI for the HARNESS Meta-Computing System,” Proceedings of International Conference of Computational Science - ICCS 2001, Lecture Notes in Computer Science, vol. 2073, Berlin, Springer Verlag, pp. 355-366, 00 2001.

Berman, F., A. Chien, K. Cooper, J. Dongarra, I. Foster, D. Gannon, L. Johnsson, K. Kennedy, C. Kesselman, J. Mellor-Crummey, et al., “The GrADS Project: Software Support for High-Level Grid Application Development,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 4, pp. 327-344, January 2001.

(271.52 KB)

Fagg, G., A. Bukovsky, and J. Dongarra, “HARNESS and Fault Tolerant MPI,” Parallel Computing, vol. 27, no. 11, pp. 1479-1496, January 2001.

(164.2 KB)

Petitet, A., S. Blackford, J. Dongarra, B. Ellis, G. Fagg, K. Roche, and S. Vadhiyar, “Numerical Libraries and The Grid,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 4, pp. 359-374, January 2001.

(67.09 KB)

Petitet, A., S. Blackford, J. Dongarra, B. Ellis, G. Fagg, K. Roche, and S. Vadhiyar, “Numerical Libraries and The Grid: The Grads Experiments with ScaLAPACK,” University of Tennessee Computer Science Technical Report, no. UT-CS-01-460, January 2001.

(91.78 KB)

Cronk, D., G. Fagg, and S. Moore, “Parallel I/O for EQM Applications,” Department of Defense Users' Group Conference Proceedings (to appear),, Biloxi, Mississippi, June 2001.

(81.41 KB)

Fagg, G., E. Gabriel, and M. Resch, “Parallel IO Support for Meta-Computing Applications: MPI_Connect IO Applied to PACX-MPI,” 8th European PVM/MPI User's Group Meeting, Lecture Notes in Computer Science, vol. 2131, Greece, Springer Verlag, Berlin, September 2001.

(129.3 KB)

Vadhiyar, S., G. Fagg, and J. Dongarra, “Performance Modeling for Self Adapting Collective Communications for MPI,” LACSI Symposium 2001, Santa Fe, NM, October 2001.

(105.49 KB)

Kennedy, K., B. Broom, K. Cooper, J. Dongarra, R. Fowler, D. Gannon, L. Johnsson, J. Mellor-Crummey, and L. Torczon, “Telescoping Languages: A Strategy for Automatic Generation of Scientific Problem-Solving Systems from Annotated Libraries,” Journal of Parallel and Distributed Computing, vol. 61, no. 12, pp. 1803-1826, December 2001.

(386.37 KB)

2000

Vadhiyar, S., G. Fagg, and J. Dongarra, “Automatically Tuned Collective Communications,” Proceedings of SuperComputing 2000 (SC'2000), Dallas, TX, November 2000.

(232.69 KB)

Fagg, G., and J. Dongarra, “FT-MPI: Fault Tolerant MPI, Supporting Dynamic Applications in a Dynamic World,” Lecture Notes in Computer Science: Proceedings of EuroPVM-MPI 2000, (Hungary: Springer Verlag, 2000), pp. V1908,346-353, January 2000.

(51.95 KB)

Berman, F., A. Chien, K. Cooper, J. Dongarra, I. Foster, D. Gannon, L. Johnsson, K. Kennedy, C. Kesselman, D. Reed, et al., “The GrADS Project: Software Support for High-Level Grid Application Development,” Technical Report, February 2000.

(347.41 KB)

Dongarra, J., G. Fagg, R. Hempel, and D. W. Walker, “Message Passing Software Systems,” Encyclopedia of Electrical and Engineering, Supplement 1: John Wiley & Sons, Inc., 00 2000.

(289.38 KB)

Cronk, D., B. Ellis, and G. Fagg, “Metacomputing: An Evaluation of Emerging Systems,” University of Tennessee Computer Science Department Technical Report, no. UT-CS-00-445, July 2000.

(280.21 KB)

Arnold, D., S. Browne, J. Dongarra, G. Fagg, and K. Moore, “Secure Remote Access to Numerical Software and Computation Hardware,” University of Tennessee Computer Science Technical Report, UT-CS-00-446, July 2000.

(402.31 KB)

Arnold, D., S. Browne, J. Dongarra, G. Fagg, and K. Moore, “Secure Remote Access to Numerical Software and Computational Hardware,” Proceedings of the DoD HPC Users Group Conference (HPCUG) 2000, Albuquerque, NM, June 2000.

(172.6 KB)

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