Publications

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Conference Paper
Luo, X., W. Wu, G. Bosilca, T. Patinyasakdikul, L. Wang, and J. Dongarra, ADAPT: An Event-Based Adaptive Collective Communication Framework,” The 27th International Symposium on High-Performance Parallel and Distributed Computing (HPDC '18), Tempe, Arizona, ACM Press, June 2018. DOI: 10.1145/3208040.3208054  (493.65 KB)
Dongarra, J., S. Moore, P. Mucci, K. Seymour, and H. You, Accurate Cache and TLB Characterization Using Hardware Counters,” International Conference on Computational Science (ICCS 2004), Krakow, Poland, Springer, June 2004. DOI: 10.1007/978-3-540-24688-6_57  (167.1 KB)
Jagode, H., A. Danalis, G. Bosilca, and J. Dongarra, Accelerating NWChem Coupled Cluster through dataflow-based Execution,” 11th International Conference on Parallel Processing and Applied Mathematics (PPAM 2015), Krakow, Poland, Springer International Publishing, September 2015.  (452.82 KB)
Ayala, A., S. Tomov, M. Stoyanov, A. Haidar, and J. Dongarra, Accelerating Multi - Process Communication for Parallel 3-D FFT,” 2021 Workshop on Exascale MPI (ExaMPI), St. Louis, MO, USA, IEEE, December 2021. DOI: 10.1109/ExaMPI54564.2021.00011
Lin, P. T., P. Nayak, A. Kashi, D. Kulkarni, A. Scheinberg, and H. Anzt, Accelerating Fusion Plasma Collision Operator Solves with Portable Batched Iterative Solvers on GPUs,” ISC High Performance 2024 International Workshops , vol. 15058, Hamburg, Germany, Springer, Cham, pp. 127 - 140, December 2024. DOI: 10.1007/978-3-031-73716-9
Book Chapter
Hori, A., Y. Tsujita, A. Shimada, K. Yoshinaga, N. Mitaro, G. Fukazawa, M. Sato, G. Bosilca, A. Bouteiller, and T. Herault, System Software for Many-Core and Multi-Core Architectures,” Advanced Software Technologies for Post-Peta Scale Computing: The Japanese Post-Peta CREST Research Project, Singapore, Springer Singapore, pp. 59–75, 2019. DOI: 10.1007/978-981-13-1924-2_4
Aupy, G., and Y. Robert, Scheduling for Fault-Tolerance: An Introduction,” Topics in Parallel and Distributed Computing: Springer International Publishing, pp. 143–170, 2018. DOI: 10.1007/978-3-319-93109-8
Penchoff, D. A., C. B. Sims, and T. L. Windus, Rare Earth Elements and Critical Materials: Uses and Availability,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 63-74, October 2021. DOI: 10.1021/bk-2021-1388.ch003
Danalis, A., and H. Jagode, Performance Application Programming Interface,” Accelerated Computing with HIP: Sun, Baruah and Kaeli, December 2022.
Parker, S., J. Mellor-Crummey, D. H. Ahn, H. Jagode, H. Brunst, S. Shende, A. D. Malony, D. DelSignore, R. Tschuter, R. Castain, et al., Performance Analysis and Debugging Tools at Scale,” Exascale Scientific Applications: Scalability and Performance Portability: Chapman & Hall / CRC Press, pp. 17-50, November 2017. DOI: 10.1201/b21930
Penchoff, D. A., E. Valeev, H. Jagode, P. Luszczek, A. Danalis, G. Bosilca, R. J. Harrison, J. Dongarra, and T. L. Windus, An Introduction to High Performance Computing and Its Intersection with Advances in Modeling Rare Earth Elements and Actinides,” Rare Earth Elements and Actinides: Progress in Computational Science Applications, vol. 1388, Washington, DC, American Chemical Society, pp. 3-53, October 2021. DOI: 10.1021/bk-2021-1388.ch001
Beck, M., T. Moore, P. Luszczek, and A. Danalis, Interoperable Convergence of Storage, Networking, and Computation,” Advances in Information and Communication: Proceedings of the 2019 Future of Information and Communication Conference (FICC), no. 2: Springer International Publishing, pp. 667-690, 2020.  (1.8 MB)
Beckman, P., J. Dongarra, N. Ferrier, G. Fox, T. Moore, D. Reed, and M. Beck, Harnessing the Computing Continuum for Programming Our World,” Fog Computing: Theory and Practice: John Wiley & Sons, Inc., 2020. DOI: 10.1002/9781119551713.ch7  (1.4 MB)
Barry, D., A. Danalis, and H. Jagode, Effortless Monitoring of Arithmetic Intensity with PAPI’s Counter Analysis Toolkit,” Tools for High Performance Computing 2018/2019: Springer, pp. 195–218, 2021. DOI: 10.1007/978-3-030-66057-4_11
Anzt, H., J. Dongarra, M. Gates, J. Kurzak, P. Luszczek, S. Tomov, and I. Yamazaki, Bringing High Performance Computing to Big Data Algorithms,” Handbook of Big Data Technologies: Springer, 2017. DOI: 10.1007/978-3-319-49340-4  (1.22 MB)
Abdelfattah, A., S. Tomov, and J. Dongarra, Batch QR Factorization on GPUs: Design, Optimization, and Tuning,” Lecture Notes in Computer Science, vol. 13350, Cham, Springer International Publishing, June 2022. DOI: 10.1007/978-3-031-08751-6_5
Anzt, H., M. Casas, C. I. Malossi, E. S. Quintana-Ortí, F. Scheidegger, and S. Zhuang, Approximate Computing for Scientific Applications,” Approximate Computing Techniques, 322: Springer International Publishing, pp. 415 - 465, January 2022. DOI: 10.1007/978-3-030-94705-7_14
Book
Penchoff, D. A., T. L. Windus, and C. C. Peterson, Rare Earth Elements and Actinides: Progress in Computational Science Applications,” ACS Symposium Series, vol. 1388, Washington, DC, American Chemical Society, October 2021. DOI: DOI: 10.1021/bk-2021-1388
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part I,” Lecture Notes in Computer Science, 1, no. 12043: Springer International Publishing, pp. 581, March 2020. DOI: 10.1007/978-3-030-43229-4
Wyrzykowski, R., E. Deelman, J. Dongarra, and K. Karczewski, Parallel Processing and Applied Mathematics: 13th International Conference, PPAM 2019, Bialystok, Poland, September 8–11, 2019, Revised Selected Papers, Part II,” Lecture Notes in Computer Science, no. 12044: Springer International Publishing, pp. 503, March 2020. DOI: 10.1007/978-3-030-43222-5
Dongarra, J., I. Duff, D. Sorensen, and H. van der Vorst, Numerical Linear Algebra for High-Performance Computers,” Software, Environments and Tools: SIAM, 1998. DOI: 10.1137/1.9780898719611
Snir, M., S. Otto, S. Huss-Lederman, D. Walker, and J. Dongarra, MPI - The Complete Reference, Volume 1: The MPI Core , Second, Cambridge, MA, USA, MIT Press, pp. 426, August 1998.
Jagode, H., H. Anzt, H. Ltaief, and P. Luszczek, Lecture Notes in Computer Science: High Performance Computing , vol. 12761: Springer International Publishing, 2021. DOI: 10.1007/978-3-030-90539-2
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part II,” Lecture Notes in Computer Science, 1, no. 12138: Springer International Publishing, pp. 697, June 2020. DOI: 10.1007/978-3-030-50417-5
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part IV,” Lecture Notes in Computer Science, 1, no. 12140: Springer International Publishing, pp. 668, June 2020. DOI: 10.1007/978-3-030-50423-6
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VI,” Lecture Notes in Computer Science, 1, no. 12142: Springer International Publishing, pp. 667, June 2020. DOI: 10.1007/978-3-030-50433-5
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part I,” Lecture Notes in Computer Science, 1, no. 12137: Springer International Publishing, pp. 707, June 2020. DOI: 10.1007/978-3-030-50371-0
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part III,” Lecture Notes in Computer Science, 1, no. 12139: Springer International Publishing, pp. 648, June 2020. DOI: 10.1007/978-3-030-50420-5
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part V,” Lecture Notes in Computer Science, 1, no. 12141: Springer International Publishing, pp. 618, June 2020. DOI: 10.1007/978-3-030-50426-7
Krzhizhanovskaya, V., G. Závodszky, M. Lees, J. Dongarra, P. Sloot, S. Brissos, and J. Teixeira, Computational Science – ICCS 2020: 20th International Conference, Amsterdam, The Netherlands, June 3–5, 2020, Proceedings, Part VII,” Lecture Notes in Computer Science, 1, no. 12143: Springer International Publishing, pp. 775, June 2020. DOI: 10.1007/978-3-030-50436-6

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