Publications

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Journal Article
Iqbal, Z., S. Nooshabadi, I. Yamazaki, S. Tomov, and J. Dongarra, “Exploiting Block Structures of KKT Matrices for Efficient Solution of Convex Optimization Problems,” IEEE Access, 2021. DOI: 10.1109/ACCESS.2021.3106054  (1.35 MB)
Gates, M., A. Abdelfattah, K. Akbudak, M. Al Farhan, R. Alomairy, D. Bielich, T. Burgess, S. Cayrols, N. Lindquist, D. Sukkari, et al., “Evolution of the SLATE linear algebra library,” The International Journal of High Performance Computing Applications, September 2024. DOI: 10.1177/10943420241286531
Dongarra, J., “The evolution of mathematical software,” Communications of the ACM, vol. 65227, issue 12, pp. 66 - 72, December 2022. DOI: 10.1145/3554977
Penchoff, D. A., C. C. Peterson, E. M. Wrancher, G. Bosilca, R. J. Harrison, E. F. Valeev, and P. D. Benny, “Evaluations of molecular modeling and machine learning for predictive capabilities in binding of lanthanum and actinium with carboxylic acids,” Journal of Radioanalytical and Nuclear Chemistry, December 2022. DOI: 10.1007/s10967-022-08620-7
Lopez, M. G., W. Joubert, V. Larrea, O. Hernandez, A. Haidar, S. Tomov, and J. Dongarra, “Evaluation of Directive-Based Performance Portable Programming Models,” International Journal of High Performance Computing and Networking, vol. 14, issue 2, pp. 165-182. DOI: http://dx.doi.org/10.1504/IJHPCN.2017.10009064  (1.12 MB)
Jagode, H., A. Danalis, R. Hoque, M. Faverge, and J. Dongarra, “Evaluation of Dataflow Programming Models for Electronic Structure Theory,” Concurrency and Computation: Practice and Experience: Special Issue on Parallel and Distributed Algorithms, vol. 2018, issue e4490, pp. 1–20, May 2018. DOI: 10.1002/cpe.4490  (1.69 MB)
Cao, Q., G. Bosilca, N. Losada, W. Wu, D. Zhong, and J. Dongarra, “Evaluating Data Redistribution in PaRSEC,” IEEE Transactions on Parallel and Distributed Systems, vol. 33, no. 8, pp. 1856-1872, August 2022. DOI: 10.1109/TPDS.2021.3131657  (3.19 MB)
Nayak, P., T. Cojean, and H. Anzt, “Evaluating Asynchronous Schwarz Solvers on GPUs,” International Journal of High Performance Computing Applications, August 2020. DOI: 10.1177/1094342020946814
Hadri, B., H. Ltaeif, E. Agullo, and J. Dongarra, “Enhancing Parallelism of Tile QR Factorization for Multicore Architectures,” Submitted to Transaction on Parallel and Distributed Systems, December 2009.  (464.23 KB)
Kolev, T., P. Fischer, M. Min, J. Dongarra, J. Brown, V. Dobrev, T. Warburton, S. Tomov, M. S. Shephard, A. Abdelfattah, et al., “Efficient exascale discretizations: High-order finite element methods,” The International Journal of High Performance Computing Applications, pp. 10943420211020803, 2021. DOI: 10.1177/10943420211020803
Baboulin, M., D. Becker, G. Bosilca, A. Danalis, and J. Dongarra, “An Efficient Distributed Randomized Algorithm for Solving Large Dense Symmetric Indefinite Linear Systems,” Parallel Computing, vol. 40, issue 7, pp. 213-223, July 2014. DOI: 10.1016/j.parco.2013.12.003  (1.42 MB)
Slattery, S. A., K. A. Surjuse, C. Peterson, D. A. Penchoff, and E. Valeev, “Economical Quasi-Newton Unitary Optimization of Electronic Orbitals,” Physical Chemistry Chemical Physics, December 2023, 2024. DOI: 10.1039/D3CP05557D
Bathie, G., L. Marchal, Y. Robert, and S. Thibault, “Dynamic DAG scheduling under memory constraints for shared-memory platforms,” Int. J. of Networking and Computing, vol. 11, no. 1, pp. 27-49, 2021.  (574.64 KB)
Voemel, C., S. Tomov, and J. Dongarra, “Divide & Conquer on Hybrid GPU-Accelerated Multicore Systems,” SIAM Journal on Scientific Computing (submitted), August 2010.
Voemel, C., S. Tomov, and J. Dongarra, “Divide and Conquer on Hybrid GPU-Accelerated Multicore Systems,” SIAM Journal on Scientific Computing, vol. 34(2), pp. C70-C82, April 2012.
Yamazaki, I., A. Ida, R. Yokota, and J. Dongarra, “Distributed-Memory Lattice H-Matrix Factorization,” The International Journal of High Performance Computing Applications, vol. 33, issue 5, pp. 1046–1063, August 2019. DOI: 10.1177/1094342019861139  (1.14 MB)
Valeev, E. F., R. J. Harrison, A. A. Holmes, C. C. Peterson, and D. A. Penchoff, “Direct Determination of Optimal Real-Space Orbitals for Correlated Electronic Structure of Molecules,” Journal of Chemical Theory and Computation, vol. 19, issue 20, pp. 7230 - 7241, October 2023. DOI: 10.1021/acs.jctc.3c00732
Kurzak, J., P. Luszczek, I. Yamazaki, Y. Robert, and J. Dongarra, “Design and Implementation of the PULSAR Programming System for Large Scale Computing,” Supercomputing Frontiers and Innovations, vol. 4, issue 1, 2017. DOI: 10.14529/jsfi170101  (764.96 KB)
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Luszczek, and J. Dongarra, “Dense Linear Algebra on Distributed Heterogeneous Hardware with a Symbolic DAG Approach,” Scalable Computing and Communications: Theory and Practice: John Wiley & Sons, pp. 699-735, March 2013.  (1.01 MB)
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Lemariner, and J. Dongarra, “DAGuE: A generic distributed DAG Engine for High Performance Computing.,” Parallel Computing, vol. 38, no. 1-2: Elsevier, pp. 27-51, 00 2012.  (830.85 KB)
Gruetzmacher, T., T. Cojean, G. Flegar, F. Göbel, and H. Anzt, “A Customized Precision Format Based on Mantissa Segmentation for Accelerating Sparse Linear Algebra,” Concurrency and Computation: Practice and Experience, vol. 40319, issue 262, January 2019. DOI: 10.1002/cpe.5418
Aupy, G., A. Benoit, B. Goglin, L. Pottier, and Y. Robert, “Co-Scheduling HPC Workloads on Cache-Partitioned CMP Platforms,” International Journal of High Performance Computing Applications, vol. 33, issue 6, pp. 1221-1239, November 2019. DOI: 10.1177/1094342019846956  (930.28 KB)
Aupy, G., A. Benoit, S. Dai, L. Pottier, P. Raghavan, Y. Robert, and M. Shantharam, “Co-Scheduling Amdhal Applications on Cache-Partitioned Systems,” International Journal of High Performance Computing Applications, vol. 32, issue 1, pp. 123–138, January 2018. DOI: 10.1177/1094342017710806  (672.52 KB)
Benoit, A., A. Cavelan, F. Cappello, P. Raghavan, Y. Robert, and H. Sun, “Coping with Silent and Fail-Stop Errors at Scale by Combining Replication and Checkpointing,” Journal of Parallel and Distributed Computing, vol. 122, pp. 209–225, December 2018. DOI: 10.1016/j.jpdc.2018.08.002  (837 KB)

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