Publications

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Journal Article
Bosilca, G., A. Bouteiller, A. Danalis, T. Herault, P. Lemariner, and J. Dongarra, DAGuE: A generic distributed DAG Engine for High Performance Computing.,” Parallel Computing, vol. 38, no. 1-2: Elsevier, pp. 27-51, 00 2012.  (830.85 KB)
Kovalchuk, S. V., V. V. Krzhizhanovskaya, M. Paszyński, D. Kranzlmüller, J. Dongarra, and P. M. A. Sloot, Computational science for a better future,” Journal of Computational Science, vol. 62, pp. 101745, July 2022. DOI: 10.1016/j.jocs.2022.101745
Sun, J., J. Fu, J. Drake, Q. Zhu, A. Haidar, M. Gates, S. Tomov, and J. Dongarra, Computational Benefit of GPU Optimization for Atmospheric Chemistry Modeling,” Journal of Advances in Modeling Earth Systems, vol. 10, issue 8, pp. 1952–1969, August 2018. DOI: 10.1029/2018MS001276  (3.4 MB)
Kovalchuk, S. V., C. de Mulatier, V. V. Krzhizhanovskaya, J. Mikyška, M. Paszyński, J. Dongarra, and P. M. A. Sloot, Computation at the Cutting Edge of Science,” Journal of Computational Science, June 2024. DOI: 10.1016/j.jocs.2024.102379
Le Fèvre, V., T. Herault, Y. Robert, A. Bouteiller, A. Hori, G. Bosilca, and J. Dongarra, Comparing the Performance of Rigid, Moldable, and Grid-Shaped Applications on Failure-Prone HPC Platforms,” Parallel Computing, vol. 85, pp. 1–12, July 2019. DOI: 10.1016/j.parco.2019.02.002  (865.18 KB)
Bosilca, G., A. Bouteiller, T. Herault, V. Le Fèvre, Y. Robert, and J. Dongarra, Comparing Distributed Termination Detection Algorithms for Modern HPC Platforms,” International Journal of Networking and Computing, vol. 12, issue 1, pp. 26 - 46, January 2022. DOI: 10.15803/ijnc.12.1_26
Ballard, G., D. Becker, J. Demmel, J. Dongarra, A. Druinsky, I. Peled, O. Schwartz, S. Toledo, and I. Yamazaki, Communication-Avoiding Symmetric-Indefinite Factorization,” SIAM Journal on Matrix Analysis and Application, vol. 35, issue 4, pp. 1364-1406, July 2014.  (593.18 KB)
Luszczek, P., W. M. Sid-Lakhdar, and J. Dongarra, Combining multitask and transfer learning with deep Gaussian processes for autotuning-based performance engineering,” The International Journal of High Performance Computing Applications, March 2023. DOI: 10.1177/10943420231166365
Terpstra, D., H. Jagode, H. You, and J. Dongarra, Collecting Performance Data with PAPI-C,” Tools for High Performance Computing 2009, 3rd Parallel Tools Workshop, Dresden, Germany, Springer Berlin / Heidelberg, pp. 157-173, May 2010. DOI: 10.1007/978-3-642-11261-4_11  (4.45 MB)
Dongarra, J., and D. Keyes, The co-evolution of computational physics and high-performance computing,” Nature Reviews Physics, August 2024. DOI: 10.1038/s42254-024-00750-z
Buttari, A., J. Langou, J. Kurzak, and J. Dongarra, A Class of Parallel Tiled Linear Algebra Algorithms for Multicore Architectures,” Parallel Computing, vol. 35, pp. 38-53, 00 2009.  (274.74 KB)
Herault, T., Y. Robert, A. Bouteiller, D. Arnold, K. Ferreira, G. Bosilca, and J. Dongarra, Checkpointing Strategies for Shared High-Performance Computing Platforms,” International Journal of Networking and Computing, vol. 9, no. 1, pp. 28–52, 2019.  (490.5 KB)
Anzt, H., S. Tomov, J. Dongarra, and V. Heuveline, A Block-Asynchronous Relaxation Method for Graphics Processing Units,” Journal of Parallel and Distributed Computing, vol. 73, issue 12, pp. 1613–1626, December 2013. DOI: http://dx.doi.org/10.1016/j.jpdc.2013.05.008  (1.08 MB)
Anzt, H., S. Tomov, M. Gates, J. Dongarra, and V. Heuveline, Block-asynchronous Multigrid Smoothers for GPU-accelerated Systems,” ICCS 2012, Omaha, NE, June 2012.  (608.95 KB)
Asch, M., T. Moore, R. M. Badia, M. Beck, P. Beckman, T. Bidot, F. Bodin, F. Cappello, A. Choudhary, B. R. de Supinski, et al., Big Data and Extreme-Scale Computing: Pathways to Convergence - Toward a Shaping Strategy for a Future Software and Data Ecosystem for Scientific Inquiry,” The International Journal of High Performance Computing Applications, vol. 32, issue 4, pp. 435–479, July 2018. DOI: 10.1177/1094342018778123  (1.29 MB)
Abdelfattah, A., A. Haidar, S. Tomov, and J. Dongarra, Batched One-Sided Factorizations of Tiny Matrices Using GPUs: Challenges and Countermeasures,” Journal of Computational Science, vol. 26, pp. 226–236, May 2018. DOI: 10.1016/j.jocs.2018.01.005  (3.73 MB)
Luszczek, P., J. Kurzak, I. Yamazaki, D. Keffer, V. Maroulas, and J. Dongarra, Autotuning Techniques for Performance-Portable Point Set Registration in 3D,” Supercomputing Frontiers and Innovations, vol. 5, no. 4, December 2018. DOI: 10.14529/jsfi180404  (720.15 KB)
Dongarra, J., M. Gates, J. Kurzak, P. Luszczek, and Y. Tsai, Autotuning Numerical Dense Linear Algebra for Batched Computation With GPU Hardware Accelerators,” Proceedings of the IEEE, vol. 106, issue 11, pp. 2040–2055, November 2018. DOI: 10.1109/JPROC.2018.2868961  (2.53 MB)
Balaprakash, P., J. Dongarra, T. Gamblin, M. Hall, J. Hollingsworth, B. Norris, and R. Vuduc, Autotuning in High-Performance Computing Applications,” Proceedings of the IEEE, vol. 106, issue 11, pp. 2068–2083, November 2018. DOI: 10.1109/JPROC.2018.2841200  (2.5 MB)
Kurzak, J., S. Tomov, and J. Dongarra, Autotuning GEMM Kernels for the Fermi GPU,” IEEE Transactions on Parallel and Distributed Systems, vol. 23, no. 11, November 2012. DOI: 10.1109/TPDS.2011.311  (742.5 KB)

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