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Conference Proceedings

Fürlinger, K., and S. Moore, “OpenMP-centric Performance Analysis of Hybrid Applications,” Proc. 2008 IEEE International Conference on Cluster Computing (CLUSTER 2008), Tsukuba, Japan, January 2008.

(218.63 KB)

Coulomb, K., A. Degomme, M. Faverge, and F. Trahay, “An open-source tool-chain for performance analysis,” Parallel Tools Workshop, Dresden, Germany, September 2011.

(622.1 KB)

Cronk, D., G. Fagg, and S. Moore, “Parallel I/O for EQM Applications,” Department of Defense Users' Group Conference Proceedings (to appear),, Biloxi, Mississippi, June 2001.

(81.41 KB)

Pjesivac–Grbovic, J., T. Angskun, G. Bosilca, G. Fagg, E. Gabriel, and J. Dongarra, “Performance Analysis of MPI Collective Operations,” 4th International Workshop on Performance Modeling, Evaluation, and Optmization of Parallel and Distributed Systems (PMEO-PDS '05), Denver, Colorado, April 2005.

(1018.28 KB)

Vadhiyar, S., G. Fagg, and J. Dongarra, “Performance Modeling for Self Adapting Collective Communications for MPI,” LACSI Symposium 2001, Santa Fe, NM, October 2001.

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Funk, Y., M. Götz, and H. Anzt, “Prediction of Optimal Solvers for Sparse Linear Systems Using Deep Learning,” 2022 SIAM Conference on Parallel Processing for Scientific Computing (PP), Philadelphia, PA, Society for Industrial and Applied Mathematics, pp. 14 - 24.

Kurzak, J., P. Luszczek, M. Faverge, and J. Dongarra, “Programming the LU Factorization for a Multicore System with Accelerators,” Proceedings of VECPAR’12, Kobe, Japan, April 2012.

(414.33 KB)

Tang, Y., G. Fagg, and J. Dongarra, “Proposal of MPI operation level Checkpoint/Rollback and one implementation,” Proceedings of IEEE CCGrid 2006: IEEE Computer Society, January 2006.

(277.27 KB)

Agullo, E., C. Augonnet, J. Dongarra, M. Faverge, H. Ltaeif, S. Thibault, and S. Tomov, “QR Factorization on a Multicore Node Enhanced with Multiple GPU Accelerators,” Proceedings of IPDPS 2011, no. ICL-UT-10-04, Anchorage, AK, October 2010.

(468.17 KB)

Angskun, T., G. Bosilca, G. Fagg, J. Pjesivac–Grbovic, and J. Dongarra, “Reliability Analysis of Self-Healing Network using Discrete-Event Simulation,” Proceedings of Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid '07): IEEE Computer Society, pp. 437-444, May 2007.

Fürlinger, K., M. Gerndt, and J. Dongarra, “Scalability Analysis of the SPEC OpenMP Benchmarks on Large-Scale Shared Memory Multiprocessors,” Proceedings of the 2007 International Conference on Computational Science (ICCS 2007), vol. 4487-4490, Beijing, China, Springer LNCS, pp. 815-822, 2007.

(145.84 KB)

Fagg, G., T. Angskun, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Scalable Fault Tolerant MPI: Extending the Recovery Algorithm,” Proceedings of 12th European Parallel Virtual Machine and Message Passing Interface Conference - Euro PVM/MPI, vol. 3666, Sorrento (Naples) , Italy, Springer-Verlag Berlin, pp. 67, September 2005.

(144.86 KB)

Arnold, D., S. Browne, J. Dongarra, G. Fagg, and K. Moore, “Secure Remote Access to Numerical Software and Computational Hardware,” Proceedings of the DoD HPC Users Group Conference (HPCUG) 2000, Albuquerque, NM, June 2000.

(172.6 KB)

Chen, Z., M. Yang, G. Francia, III, and J. Dongarra, “Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing,” Proceedings of Workshop on Self Adapting Application Level Fault Tolerance for Parallel and Distributed Computing at IPDPS, pp. 1-8, March 2007.

(162.47 KB)

Demmel, J., J. Dongarra, V. Eijkhout, E. Fuentes, A. Petitet, R. Vuduc, C. Whaley, and K. Yelick, “Self Adapting Linear Algebra Algorithms and Software,” IEEE Proceedings (to appear), 00 2004.

(587.67 KB)

Angskun, T., G. Fagg, G. Bosilca, J. Pjesivac–Grbovic, and J. Dongarra, “Self-Healing Network for Scalable Fault Tolerant Runtime Environments,” DAPSYS 2006, 6th Austrian-Hungarian Workshop on Distributed and Parallel Systems, Innsbruck, Austria, January 2006.

(162.83 KB)

Kennedy, K., J. Mellor-Crummey, K. Cooper, L. Torczon, F. Berman, A. Chien, D. Angulo, I. Foster, D. Gannon, L. Johnsson, et al., “Toward a Framework for Preparing and Executing Adaptive Grid Programs,” International Parallel and Distributed Processing Symposium: IPDPS 2002 Workshops, Fort Lauderdale, FL, pp. 0171, April 2002.

(64.5 KB)

Wolf, F., B. Wylie, E. Abraham, W. Frings, K. Fürlinger, M. Geimer, M-A. Hermanns, B. Mohr, S. Moore, and M. Pfeifer, “Usage of the Scalasca Toolset for Scalable Performance Analysis of Large-scale Parallel Applications,” Proceedings of the 2nd International Workshop on Tools for High Performance Computing, Stuttgart, Germany, Springer, pp. 157-167, January 2008.

(229.2 KB)

Wolf, F., B. Wylie, E. Abraham, W. Frings, K. Fürlinger, M. Geimer, M-A. Hermanns, B. Mohr, S. Moore, and M. Pfeifer, “Usage of the Scalasca Toolset for Scalable Performance Analysis of Large-scale Parallel Applications,” Proceedings of the 2nd International Workshop on Tools for High Performance Computing, Stuttgart, Germany, Springer, pp. 157-167, January 2008.

(229.2 KB)

Fürlinger, K., J. Dongarra, and M. Gerndt, “On Using Incremental Profiling for the Performance Analysis of Shared Memory Parallel Applications,” Proceedings of the 13th International Euro-Par Conference on Parallel Processing (Euro-Par '07), Rennes, France, Springer LNCS, January 2007.

Anzt, H., J. Dongarra, G. Flegar, E. S. Quintana-Orti, and A. E. Thomas, “Variable-Size Batched Gauss-Huard for Block-Jacobi Preconditioning,” International Conference on Computational Science (ICCS 2017), vol. 108, Zurich, Switzerland, Procedia Computer Science, pp. 1783-1792, June 2017.

(512.57 KB)

Fürlinger, K., and S. Moore, “Visualizing the Program Execution Control Flow of OpenMP Applications,” Proc. 4th International Workshop on OpenMP (IWOMP 2008), West Lafayette, Indiana, Lecture Notes in Computer Science 5004, pp. 181-190, January 2008.

(194.25 KB)

Journal Article

Anzt, H., M. Baboulin, J. Dongarra, Y. Fournier, F. Hulsemann, A. Khabou, and Y. Wang, “Accelerating the Conjugate Gradient Algorithm with GPU in CFD Simulations,” VECPAR, 2016.

Demmel, J., J. Dongarra, A. Fox, S. Williams, V. Volkov, and K. Yelick, “Accelerating Time-To-Solution for Computational Science and Engineering,” SciDAC Review, 00 2009.

(739.11 KB)

Dongarra, J., M. Faverge, H. Ltaeif, and P. Luszczek, “Achieving numerical accuracy and high performance using recursive tile LU factorization with partial pivoting,” Concurrency and Computation: Practice and Experience, vol. 26, issue 7, pp. 1408-1431, May 2014.

(1.96 MB)

Anzt, H., J. Dongarra, G. Flegar, N. J. Higham, and E. S. Quintana-Orti, “Adaptive Precision in Block-Jacobi Preconditioning for Iterative Sparse Linear System Solvers,” Concurrency and Computation: Practice and Experience, vol. 31, no. 6, pp. e4460, March 2019.

(341.54 KB)

Masliah, I., A. Abdelfattah, A. Haidar, S. Tomov, M. Baboulin, J. Falcou, and J. Dongarra, “Algorithms and Optimization Techniques for High-Performance Matrix-Matrix Multiplications of Very Small Matrices,” Parallel Computing, vol. 81, pp. 1–21, January 2019.

(3.27 MB)

Bhowmick, S., V. Eijkhout, Y. Freund, E. Fuentes, and D. Keyes, “Application of Machine Learning to the Selection of Sparse Linear Solvers,” International Journal of High Performance Computing Applications (submitted), 00 2006.

(392.96 KB)

Bhowmick, S., V. Eijkhout, Y. Freund, E. Fuentes, and D. Keyes, “Application of Machine Learning to the Selection of Sparse Linear Solvers,” International Journal of High Performance Computing Applications (submitted), 00 2006.

(392.96 KB)

Asch, M., T. Moore, R. M. Badia, M. Beck, P. Beckman, T. Bidot, F. Bodin, F. Cappello, A. Choudhary, B. R. de Supinski, et al., “Big Data and Extreme-Scale Computing: Pathways to Convergence - Toward a Shaping Strategy for a Future Software and Data Ecosystem for Scientific Inquiry,” The International Journal of High Performance Computing Applications, vol. 32, issue 4, pp. 435–479, July 2018.

(1.29 MB)

Asch, M., T. Moore, R. M. Badia, M. Beck, P. Beckman, T. Bidot, F. Bodin, F. Cappello, A. Choudhary, B. R. de Supinski, et al., “Big Data and Extreme-Scale Computing: Pathways to Convergence - Toward a Shaping Strategy for a Future Software and Data Ecosystem for Scientific Inquiry,” The International Journal of High Performance Computing Applications, vol. 32, issue 4, pp. 435–479, July 2018.

(1.29 MB)

Fagg, G., and J. Dongarra, “Building and using a Fault Tolerant MPI implementation,” International Journal of High Performance Applications and Supercomputing (to appear), 00 2004.

Fürlinger, K., and S. Moore, “Capturing and Analyzing the Execution Control Flow of OpenMP Applications,” International Journal of Parallel Programming, vol. 37, no. 3, pp. 266-276, 00 2009.

Herault, T., Y. Robert, A. Bouteiller, D. Arnold, K. Ferreira, G. Bosilca, and J. Dongarra, “Checkpointing Strategies for Shared High-Performance Computing Platforms,” International Journal of Networking and Computing, vol. 9, no. 1, pp. 28–52, 2019.

(490.5 KB)

Eijkhout, V., E. Fuentes, T. Eidson, and J. Dongarra, “The Component Structure of a Self-Adapting Numerical Software System,” International Journal of Parallel Programming, vol. 33, no. 2, June 2005.

(64.88 KB)

Sun, J., J. Fu, J. Drake, Q. Zhu, A. Haidar, M. Gates, S. Tomov, and J. Dongarra, “Computational Benefit of GPU Optimization for Atmospheric Chemistry Modeling,” Journal of Advances in Modeling Earth Systems, vol. 10, issue 8, pp. 1952–1969, August 2018.

(3.4 MB)

Agarwal, P., R. A.. Alexander, E.. Apra, S. Balay, A. S. Bland, J. Colgan, E. D'Azevedo, J. Dongarra, T. Dunigan, M. Fahey, et al., “Cray X1 Evaluation Status Report,” Oak Ridge National Laboratory Report, vol. /-2004/13, January 2004.

(817.33 KB)

Gruetzmacher, T., T. Cojean, G. Flegar, F. Göbel, and H. Anzt, “A Customized Precision Format Based on Mantissa Segmentation for Accelerating Sparse Linear Algebra,” Concurrency and Computation: Practice and Experience, vol. 40319, issue 262, January 2019.

Pjesivac–Grbovic, J., G. Bosilca, G. Fagg, T. Angskun, and J. Dongarra, “Decision Trees and MPI Collective Algorithm Selection Problem,” Euro-Par 2007, Rennes, France, Springer, pp. 105–115, August 2007.

(552.94 KB)

Kolev, T., P. Fischer, M. Min, J. Dongarra, J. Brown, V. Dobrev, T. Warburton, S. Tomov, M. S. Shephard, A. Abdelfattah, et al., “Efficient exascale discretizations: High-order finite element methods,” The International Journal of High Performance Computing Applications, pp. 10943420211020803, 2021.

Gabriel, E., G. Fagg, and J. Dongarra, “Evaluating The Performance Of MPI-2 Dynamic Communicators And One-Sided Communication,” Lecture Notes in Computer Science, Recent Advances in Parallel Virtual Machine and Message Passing Interface, 10th European PVM/MPI User's Group Meeting, vol. 2840, Venice, Italy, Springer-Verlag, Berlin, pp. 88-97, September 2003.

(254.08 KB)

Jagode, H., A. Danalis, R. Hoque, M. Faverge, and J. Dongarra, “Evaluation of Dataflow Programming Models for Electronic Structure Theory,” Concurrency and Computation: Practice and Experience: Special Issue on Parallel and Distributed Algorithms, vol. 2018, issue e4490, pp. 1–20, May 2018.

(1.69 MB)

Fischer, M., and J. Dongarra, “Experiences with Windows 95/NT as a Cluster Computing Platform for Parallel Computing,” Parallel and Distributed Computing Practices, Special Issue: Cluster Computing, vol. 2, no. 2: Nova Science Publishers, USA, pp. 119-128, February 1999.

(164.04 KB)

Fagg, G., J. Pjesivac–Grbovic, G. Bosilca, T. Angskun, and J. Dongarra, “Flexible collective communication tuning architecture applied to Open MPI,” 2006 Euro PVM/MPI (submitted), Bonn, Germany, January 2006.

(206.58 KB)

Dewolfs, D., J. Broeckhove, V. Sunderam, and G. Fagg, “FT-MPI, Fault-Tolerant Metacomputing and Generic Name Services: A Case Study,” Lecture Notes in Computer Science, vol. 4192, no. ICL-UT-06-14: Springer Berlin / Heidelberg, pp. 133-140, 00 2006.

(362.44 KB)

Anzt, H., T. Cojean, G. Flegar, F. Göbel, T. Grützmacher, P. Nayak, T. Ribizel, Y. Mike Tsai, and E. S. Quintana-Ortí, “Ginkgo: A Modern Linear Operator Algebra Framework for High Performance Computing,” ACM Transactions on Mathematical Software, vol. 48, issue 12, pp. 1 - 33, March 2022.

(4.2 MB)

Berman, F., A. Chien, K. Cooper, J. Dongarra, I. Foster, D. Gannon, L. Johnsson, K. Kennedy, C. Kesselman, J. Mellor-Crummey, et al., “The GrADS Project: Software Support for High-Level Grid Application Development,” International Journal of High Performance Applications and Supercomputing, vol. 15, no. 4, pp. 327-344, January 2001.

(271.52 KB)

Beck, M., J. Dongarra, G. Fagg, A. Geist, P. Gray, J. Kohl, M. Migliardi, K. Moore, T. Moore, P. Papadopoulous, et al., “HARNESS: A Next Generation Distributed Virtual Machine,” International Journal on Future Generation Computer Systems, vol. 15, no. 5-6, pp. 571-582, January 1999.

(183.78 KB)

Fagg, G., A. Bukovsky, and J. Dongarra, “HARNESS and Fault Tolerant MPI,” Parallel Computing, vol. 27, no. 11, pp. 1479-1496, January 2001.

(164.2 KB)

Fagg, G., and J. Dongarra, “HARNESS Fault Tolerant MPI Design, Usage and Performance Issues,” Future Generation Computer Systems, vol. 18, no. 8, pp. 1127-1142, January 2002.

(403.41 KB)

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